Table 1. SNPs detected by sequencing in bovine PTK2 gene.
NO. | Gene region | Position on UMD_3.1 | Nucleotide on UMD_3.1 | Alternative nucleotide | Amino acid substitution |
1 | Intron2 | 3895208 | T | G | |
2 | Exon2 | 3916050 | T | C | |
3 | Exon2 | 3916093 | G | A | |
4 | Intron3 | 3934715 | C | T | |
5 | Intron6 | 3968566 | C | T | |
6 | Intron6 | 3968605 | G | A | |
7 | Intron8 | 3989212 | T | C | |
8 | Intron10 | 3985663 | T | C | |
9 | Intron12 | 3986703 | G | A | |
10 | Intron12 | 3987085 | T | C | |
11 | Intron13 | 3988746 | T | C | |
12 | Intron15 | 3995419 | G | A | |
13 | Intron15 | 3995746 | G | C | |
14 | Intron16 | 4012367 | T | C | |
15 | Intron17 | 4014815 | A | G | |
16 | Exon21 | 4023970 | T | C | D573D |
17 | Intron21 | 4024010 | A | G | |
18 | Intron22 | 4025639 | T | C | |
19 | Exon23 | 4027911 | G | A | V629V |
20 | Intron23 | 4028181 | C | T | |
21 | Intron23 | 4028294 | C | T | |
22 | Intron23 | 4030462 | C | T | |
23 | Intron23 | 4030475 | G | A | |
24 | Intron25 | 4044153 | C | T | |
25 | Intron25 | 4044215 | T | C | |
26 | Intron25 | 4044389 | C | T | |
27 | Intron27 | 4046579 | C | A | |
28 | Exon31 | 4059628 | C | T | L926L |
29 | Intron31 | 4059863 | A | C | |
30 | Intron31 | 4059938 | G | A | |
31 | Exon32 | 4061053 | C | T | V996V |
32 | Exon32 | 4061098 | T | G | I981M |
33 | Exon33 | 4063793 | C | A | I992I |