Skip to main content
. 2013 Dec 26;9(12):e1003825. doi: 10.1371/journal.ppat.1003825

Table 1. Primers used in this study.

Purpose Primer sequencea Construct name
Overlapping PCR primers to create UL21a RxL-AxA mutation 5′cgagctcgtgcgagggctttccaaaatc3′ 5′gattttggaaagccctcgcacgagctcg3′ Non applicable
Overlapping primers to create template for amplifying ChUL21a 5′atgggaggcagtcccgaccccgatctctcggtggccaccgagggtgtgaggcccgtggtccgcgcggacctgttccgagcccgccggcccctgc3′ 5′cctgaaggtgctggtgatgctgatggtagttctcaaaaagccggcgccgggcccgcggagcatagaaagccagacggcgcaggggccggcgggct3′ 5′tcaccagcaccttcaggtcccgccgccgattcatcggatcgtcgctgtgcccggaggggacgaggaagcgataccgatggacctgccgagggaga3′ 5′tgggcggaacgtcgtccaacagcagcaccagcgggttgggcagcgggcggtcgggcggtatatcggcggcgacctggatctccctcggcaggtcc3′ 5′ttaaaaatgttcccagttctcttcgcgtatcacggggtactcgcggggcactcggaaaggagcgaagccgggcggcatgggcggaacgtcgtcc3′ Non applicable
PCR primers to clone UL21a into pLKO vector 5′gtcgaccgagatgggaggtagccctgttcc3′ 5′ggaattcttaaaactggtcccaatgttctt3′ pLKO-UL21a pLKO-UL21a RxL-AxA
PCR primers to clone RhUL21a into pLKO vector 5′gtcgaccgagatgggaggcagcaccga3′ 5′ggaattcttaagcgtgtgcttcttcat3′ pLKO-RhUL21a
PCR primers to clone ChUL21a into pLKO vector 5′gggtcgacatgggaggcagtcccgac3′ 5′gggaattcttaaaaatgttcccagttctc3′ pLKO-ChUL21a
PCR primers to clone 3xFlag-Cyclin A into pLKO vector 5′gcgtcgacatggactacaaagaccatgacggtgatttaaagatcatgatatcgattacaaggatgacgatgacaagttgggcaactctgcgcc3′ 5′gcgaattcttacagatttagtgtctctggtggg3′ pLKO-3xFlag-Cyclin A pLKO-3xFlag-Cyclin A ΔD-box
PCR primers to clone HA-Ubiquitin into pLKO vector 5′gcgctagcatgtacccatacgacgtccca3′ 5′gcgaattctcacccacctcttagtctt3′ pLKO-HA-Ubiquitin
Primer pairs to quantify cyclin A transcript levels by RT-qPCR 5′gcatgtcaccgttcctcctt3′ 5′cagggcatcttcacgctctat3′ Non applicable
Primer pairs to quantify GAPDH transcript levels by RT-qPCR 5′ctgttgctgtagccaaattcgt3′ 5′acccactcctccacctttgac3′ Non applicable

a Restriction sites are underlined; base pair changes to introduce mutations are underlined and in italics.