Table 1. Primers used in this study.
Purpose | Primer sequencea | Construct name |
Overlapping PCR primers to create UL21a RxL-AxA mutation | 5′cgagctcgtgcgagggctttccaaaatc3′ 5′gattttggaaagccctcgcacgagctcg3′ | Non applicable |
Overlapping primers to create template for amplifying ChUL21a | 5′atgggaggcagtcccgaccccgatctctcggtggccaccgagggtgtgaggcccgtggtccgcgcggacctgttccgagcccgccggcccctgc3′ 5′cctgaaggtgctggtgatgctgatggtagttctcaaaaagccggcgccgggcccgcggagcatagaaagccagacggcgcaggggccggcgggct3′ 5′tcaccagcaccttcaggtcccgccgccgattcatcggatcgtcgctgtgcccggaggggacgaggaagcgataccgatggacctgccgagggaga3′ 5′tgggcggaacgtcgtccaacagcagcaccagcgggttgggcagcgggcggtcgggcggtatatcggcggcgacctggatctccctcggcaggtcc3′ 5′ttaaaaatgttcccagttctcttcgcgtatcacggggtactcgcggggcactcggaaaggagcgaagccgggcggcatgggcggaacgtcgtcc3′ | Non applicable |
PCR primers to clone UL21a into pLKO vector | 5′gtcgaccgagatgggaggtagccctgttcc3′ 5′ggaattcttaaaactggtcccaatgttctt3′ | pLKO-UL21a pLKO-UL21a RxL-AxA |
PCR primers to clone RhUL21a into pLKO vector | 5′gtcgaccgagatgggaggcagcaccga3′ 5′ggaattcttaagcgtgtgcttcttcat3′ | pLKO-RhUL21a |
PCR primers to clone ChUL21a into pLKO vector | 5′gggtcgacatgggaggcagtcccgac3′ 5′gggaattcttaaaaatgttcccagttctc3′ | pLKO-ChUL21a |
PCR primers to clone 3xFlag-Cyclin A into pLKO vector | 5′gcgtcgacatggactacaaagaccatgacggtgatttaaagatcatgatatcgattacaaggatgacgatgacaagttgggcaactctgcgcc3′ 5′gcgaattcttacagatttagtgtctctggtggg3′ | pLKO-3xFlag-Cyclin A pLKO-3xFlag-Cyclin A ΔD-box |
PCR primers to clone HA-Ubiquitin into pLKO vector | 5′gcgctagcatgtacccatacgacgtccca3′ 5′gcgaattctcacccacctcttagtctt3′ | pLKO-HA-Ubiquitin |
Primer pairs to quantify cyclin A transcript levels by RT-qPCR | 5′gcatgtcaccgttcctcctt3′ 5′cagggcatcttcacgctctat3′ | Non applicable |
Primer pairs to quantify GAPDH transcript levels by RT-qPCR | 5′ctgttgctgtagccaaattcgt3′ 5′acccactcctccacctttgac3′ | Non applicable |
a Restriction sites are underlined; base pair changes to introduce mutations are underlined and in italics.