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. 2004 Mar 23;101(14):4954–4959. doi: 10.1073/pnas.0401141101

Table 3. Types of mutations detected in exons 5-9 p53 in the stratum granulosum of human SCC.

Base change (total no.) Coding strand Codon p53 Sequence AA change* Lesion region
UVA fingerprints
AT → CG (1) A → C 311 caAca Asn → Thr SCC4,1
UVB fingerprints C → T 289 ctCc Leu → Leu SCC1,1
GC → AT (9) C → T 157 gtCc Val → Val SCC1,6
C → T 233 cCact§ His → Tyr SCC1,3
C → T 318 cCaa§ Pro → Leu SCC4,1
C → T 314 tCct Ser → Phe SCC4,3
C → T 296 tCacc His → Tyr SCC4,6
C → T 251 atCc Ile → Ile SCC7,1
G → A 197 aGtgg Val → Met SCC3,1
G → A 226 gGct Gly → Asp SCC6,6
ROS
GC → TA (6) G → T 290 cGca Arg → Leu SCC4,6
C → A 195 atCc Ile → Ile SCC3,1
C → A 208 gaCa Asp → Glu SCC3,1
C → A 312 acCa§ Thr → Thr SCC4,1
C → A 309 cCca§ Pro → His SCC4,3
C → A 313 agCt Ser → Arg SCC4,3
GC → CG (6) G → C 271 tGagg Glu → Gln SCC1,3
G → C 228 tGact Asp → His SCC6,6
G → C 326 aGaat Glu → Gln SCC6,6
C → G 190 cCtc§ Pro → Arg SCC1,1
C → G 252 cCtca§ Leu → Val SCC7,1
C → G 301 gCccc Pro → Ala SCC1,3
GC → AT (1) C → T 310 aaCa Asn → Asn SCC4,1
Other changes
AT → GC (3) T → C 195 aTcc Ile → Thr SCC1,1
A → G 196 cgAg Arg → Arg SCC3,1
A → G 249 gAggc Arg → Gly SCC1,1
AT → TA (3) T → A 134 gTttt Phe → Ile SCC1,6
A → T 195 tAtcc Ile → Phe SCC1,1
A → T 310 aAca Asn → Ile SCC4.3
CpG sites (2) C → T 152 cCgc§ Pro → Leu SCC1,6
C → T 158 cCgcg§ Arg → Cys SCC1,6

Codons in bold type refer to hot-spot codons.

*

Amino acid changes are shown in bold type.

Lesion number and region laser-captured as defined in Fig. 1A.

Base-pair substitutions occur at Py-Py sites or Py runs on either nontranscribed or transcribed strand.

§

5′G of 5′-GG-3′ on either nontranscribed or transcribed strand.

Base changes potentially attributable to UVA indirectly through the production of ROS, not used as UVA fingerprints for data analysis.