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. Author manuscript; available in PMC: 2014 Feb 1.
Published in final edited form as: Nat Protoc. 2013 Jul 11;8(8):10.1038/nprot.2013.084. doi: 10.1038/nprot.2013.084

Table 6.

Counts of reads mapped to the Trinity assembly

Read classification Count of individual reads Percent of mapped reads
Proper pairing 8102100 93.12
Left only 307933 3.54
Right only 284203 3.27
Improper pairing 6476 0.07