. Author manuscript; available in PMC: 2013 Dec 30.

Published in final edited form as: Adv Bot Res. 2013 Mar 14;66:10.1016/B978-0-12-397923-0.00010-2. doi: 10.1016/B978-0-12-397923-0.00010-2

Table 9.

Identity and similarity in Fur/Mur, Irr and Zur from R. capsulatus SB1003, R. shaeroides 2.4.1 and R. ferroxidans SW2. Similarity is indicated using parenthesis.

Fur/Mur	Rcap	Rsph	Rfer
Rcap	No Rcap Fur	-	-
Rsph	No Rcap Fur	100 (100)	-
Rfer	No Rcap Fur	74.64 (84.78)	100 (100)

Irr	Rcap	Rsph	Rfer

Rcap	100 (100)	-	-
Rsph	62.59 (76.87)	100 (100)	-
Rfer	60.00 (73.51)	66.67 (78.23)	100 (100)

Zur	Rcap	Rsph	Rfer

Rcap	100 (100)	-	-
Rsph	63.37 (71.51)	100 (100)	-
Rfer	68.64 (75.15)	73.21 (80.36)	100 (100)

Sequences were aligned using the CLC Sequence Viewer software (CLC Bio, Denmark). Similarity and identity scores were calculated based on alignments using the “Ident and Sim” utility (http://www.bioinformatics.org/sms2/ident_sim.html) (Stothard, 2000).