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. Author manuscript; available in PMC: 2014 Oct 4.
Published in final edited form as: J Proteome Res. 2013 Sep 18;12(10):10.1021/pr4005103. doi: 10.1021/pr4005103

Figure 2.

Figure 2

Summary of quantified proteomes. A, Venn diagram comparing the overlap between proteins quantified with 2+ peptides in the un-enriched sample versus identified proteins in the phosphoproteome B-C, The intensity of quantified proteins (B) and phosphopeptides (C) plotted against ranked abundance. Proteins/phosphopeptides that were significantly different between CVN-AD and WT mice brain lysates at 42 wks of age were determined by using an ANOVA p-value <0.05 and a Cohen’s d effect size > 1.7 as described in the Methods and are denoted with black circles.