TABLE 2.
Ct values for representative prn strains and clinical isolates with rare prn types for the QJF3-QJR1 and QJF4-QJR1 amplifications
| Strain | prn type | Ct value (Tma [°C]) for:
|
Result | |
|---|---|---|---|---|
| QJF3-QJR1 | QJF4-QJR1 | |||
| prn1 | 30.7 (88.0) | 37.4 (—) | 1595T | |
| prn2 | 29.5 (88.0) | 36.5 (—) | 1595T | |
| prn3 | 29.6 (80.0) | 36.6 (—) | 1595T | |
| prn4 | 28.2 (87.5) | 38.9 (—) | 1595T | |
| prn6 | 41.7 (—) | 28.9 (88.5) | 1595G | |
| prn7 | 44.5 (—) | 29.7 (88.5) | 1595G | |
| prn8 | 40.8 (—) | 27.3 (88.5) | 1595G | |
| prn9 | 28.8 (88.0) | 35.9 (—) | 1595T | |
| prn10 | 40.0 (—) | 27.9 (88.5) | 1595G | |
| prn11 | 29.1 (88.0) | 35.1 (—) | 1595T | |
| Bord4 | prn9 | 34.1 (87.5) | 40.2 (—) | 1595T |
| Bord49 | prn11 | 32.4 (88.5) | 42.7 (—) | 1595T |
| Bord68 | prn9 | 25.8 (87.5) | 36.2 (—) | 1595T |
| Negative control | >50 (—) | 45.7 (—) | Negative | |
a
Tm of the main peak. —, no specific melting peak observed.