TABLE 1.
Virus | ENIVD sample | Strainb | Copies/ml expected | Copies/ml determinedc | % Of laboratories achieving positive resultsd |
---|---|---|---|---|---|
Ebola | F6 | Mayinga | —e | 2.2E7 | 92.9 |
F9 | Mayinga | 2.2E6 | 2.7E6 | 85.7 | |
F4 | Mayinga | 2.2E5 | 1.6E5 | 78.6 | |
Marburg | F5 | Musoke | — | 3.6E7 | 78.6 |
F3 | Ratayczak | — | 3.9E4 | 64.3 | |
F10 | Ratayczak | 3.9E3 | 3.9E3 | 57.1 | |
F18 | Ratayczak | 3.9E2 | <2,647f | 35.7 | |
Lassa | L11 | AV | 4.0E5 | 5.4E5 | 85.7 |
L4 | AV | 4.0E4 | 2.6E4 | 78.6 | |
L8 | AV | 4.0E3 | 2.6E3 | 50 | |
L17 | AV | 4.0E2 | <2,445f | 21.4 | |
L6 | Josiah | 4.8E6 | 3.8E6 | 71.4 | |
L9 | Josiah | 4.8E5 | 7.0E5 | 85.7 | |
L3 | Josiah | 4.8E4 | 1.2E5 | 71.4 | |
L2 | Josiah | 4.8E3 | 7.2E3 | 50 | |
Orthopox | P12 | MPX Lam87 | 5.0E7 | 3.2E7 | 100 |
P1 | MPX Lam87 | 5.0E6 | 3.4E6 | 95.6 | |
P10 | MPX Lam87 | 5.0E5 | 5.6E5 | 81.8 | |
P5 | MPX Lam87 | 5.0E4 | 8.0E4 | 68.2 | |
P14 | MPX Lam87 | 5.0E3 | 8.0E3 | 59.1 | |
P3 | MPX Lam87 | 5.0E2 | 1.6E3 | 45.5 | |
P6 | MPX Lam87 | 5.0E1 | <1,000f | 27.3 | |
P7 | CML | 8.8E6 | 8.8E6 | 95.6 | |
P9 | CPXV 81/02 | — | 6.0E5 | 86.4 | |
P15 | CPX Brithon | — | 2.4E6 | 95.6 | |
P13 | VAC | — | 1.0E6 | 90.9 | |
P11 | VAC mod.g | — | 1.6E5 | 86.4 | |
P4 | ECT | — | 3.6E6 | 72.7 |
All samples available on request through ENIVD (www.enivd.de).
Orthopox virus species: monkeypox virus (MPX), vaccinia virus (VAC), cowpox virus (CPX), camelpox virus (CML), mousepox virus (ectromelia virus [ECT]).
Measured by real-time PCR to exclude degradation of virus in plasma after heating and irradiation.
Coefficients of correlation of detection rates with virus concentration in samples: filovirus panel, r = 0.914; Lassa virus panel, r = 0.85; and orthopox virus panel, r = 0.914 (P values for the correlations were 0.004, 0.0081, and ≤0.00009, respectively). Positive test results for the total panel for Ebola and Marburg virus, Lassa virus, and orthopox virus, 70, 73, and 78%, respectively; positive test results for samples with ≤104 virus copies, 46, 40, and 44%, respectively.
—, virus concentration originally determined in this sample.
Virus detected but below linear quantification range of assay.
mod., modified.