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. Author manuscript; available in PMC: 2015 Feb 1.
Published in final edited form as: J Mol Graph Model. 2013 Oct 24;0:10.1016/j.jmgm.2013.10.007. doi: 10.1016/j.jmgm.2013.10.007

Table 3.

Binding energies (kcal/mol) of DNA nucleobases on mono-vacant defective graphene (C71H24) at the M06-2X and B97-D levels. The data in the parenthesis refer to those without BSSE. Basis sets, A:6-31G(d); B:6-311++G(d,p)

M06-2X/A M06-2X/B//M06-2X/A B97-D/B//M06-2X/A
  Adenine
C71H24-ade-a 16.2 14.2 (19.2) 17.5 (22.2)
C105H28-ade-a 16.5 14.3 (19.5) 18.0 (22.8)
C71H24-ade-b 15.4 13.4 (18.4) 16.3 (21.0)
C71H24-ade-c 15.3 13.5 (18.2) 16.4 (20.8)
  Guanine
C71H24-gua-a 18.7 16.6 (22.3) 18.9 (24.2)
C71H24-gua-b 18.4 16.4 (22.0) 17.1 (22.3)
C71H24-gua-c 19.2 17.0 (22.5) 19.5 (24.6)
C71H24-gua-d 17.8 15.7 (21.0) 18.8 (23.7)
  Thymine
C71H24- thy-a 15.2 13.7 (18.3) 14.4 (18.6)
C71H24-thy-b 16.7 15.3 (19.8) 17.3 (21.5)
C71H24-thy-c 17.3 15.8 (20.2) 18.3 (22.3)
  Cytosine
C71H24-cyt-a 14.2 12.4 (16.9) 13.2 (17.3)
C71H24-cyt-b 16.0 14.5 (18.9) 16.1 (20.2)
C71H24-cyt-c 15.3 13.8 (18.0) 15.8 (19.6)