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. 2013 Oct 31;25(10):3785–3807. doi: 10.1105/tpc.113.115428

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© 2013 American Society of Plant Biologists. All rights reserved.

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Figure 6. — CRE Analysis of Differentially Expressed Genes and Prediction of New CREs.

(A) CRE analysis within the 500 bp promoter region of all upregulated genes.

(B) CRE analysis within the 500 bp promoter region of all downregulated genes.

(C) CRE analysis within the 500 bp promoter region of all upregulated transcription factors.

(D) CRE analysis within the 500 bp promoter region of all downregulated genes encoding transcription factors.

(E) Sequence logo of CRE prediction for the differentially expressed genes at T4.

(F) Sequence logo of CRE prediction for the differentially expressed genes at T5.

(G) Sequence logo of CRE prediction for the differentially expressed genes at T10.