Table 3.
Selection signatures around genes with known effect on milk and beef traits
| Gene | BTA | Position of target gene | Breed | Position of signature | SNP | Gene |
|---|---|---|---|---|---|---|
| ABCG2 |
6 |
37,959,536-38,030,586 |
FGV |
32,267,848-42,353,432 |
199 |
26 |
| MWF |
36,697,298-42,548,023 |
146 |
22 |
|||
| OBV |
37,642,516-38,052,662 |
10 |
7 |
|||
| BBV |
37,897,068-38,052,662 |
3 |
3 |
|||
| Casein cluster |
6 |
87,141,556-87,392,750 |
BBV |
84,205,130-96,165,559 |
227 |
68 |
| DGAT1 |
14 |
1,795,425-1,804,838 |
OBV |
1-2,228,124 |
16 |
37 |
| MWF |
1,524,578-2,205,696 |
12 |
34 |
|||
| TG |
14 |
9,262,250-9,508,938 |
BBB |
9,355,364-9,415,628 |
2 |
2 |
| GH1 |
19 |
48,768,618-48,772,014 |
BBV |
47,693,674-51,182,163 |
70 |
41 |
| GHR | 20 | 31,890,736-32,199,996 | RH | 28,500,780-39,168,038 | 195 | 50 |
Six target genes (Gene), their location on Bos taurus autosome (BTA) with physical position (bp) of the gene, the breed in which a selection signature was detected (Breed), physical position (bp) of the signature and number of SNPs (SNP) and genes (Gene) within the signature are given.