Table 6.
Most extended selection signatures
| BTA | Breed | Start | End | SNP | Genes | Candidate genes mentioned in the text |
|---|---|---|---|---|---|---|
| 4 |
BBB |
68,372,478 |
72,954,413 |
71 |
26 |
NPY |
| 6 |
FGV |
32,267,848 |
42,353,432 |
199 |
26 |
ABCG2, MEPE, IBSP, LAP3, NCAPG, LCORL |
| 6 |
MWF |
36,697,298 |
42,548,023 |
146 |
22 |
ABCG2, MEPE, IBSP, LAP3, NCAPG, LCORL |
| 6 |
DFV |
68,581,139 |
72,640,834 |
119 |
23 |
PDGFRA, KIT, KDR |
| 6 |
BBV |
84,205,130 |
96,165,559 |
227 |
68 |
BTC, ANKRD17, CSN1S1, CSN2, CSN1S2, CSN3, IL8 |
| 9 |
GLW |
40,644,068 |
58,813,449 |
314 |
47 |
SIM1 |
| 11 |
OBV |
64,291,486 |
71,493,179 |
130 |
38 |
PROKR1, GFPT1, GMCL1, PCBP1, EHD3 |
| 17 |
IMB |
56,144,286 |
56,591,720 |
7 |
8 |
CAMKK2, ATP2A2 |
| 18 |
RH |
13,218,147 |
25,386,867 |
231 |
85 |
MC1R, NKD1, NOD2, SALL1 |
| 20 | ABB | 2,571,860 | 3,171,036 | 9 | 4 | NPM1, FGF18 |
The most extended signature of each of the ten breeds (Breed) is shown. Bos taurus autosome (BTA), the position in bp (Start to End) and the number of SNPs (SNP) per signature are given. From all positional candidate genes within the respective signature (Genes) only genes mentioned in the text are listed.