Table 1.
Amplification primers
| Amplicon number | Amplicon size | Primer name | Primer sequence | Source |
|---|---|---|---|---|
| 1 |
2417 |
F402 |
ATCTTTTGGCGGTATGCACTTT |
New |
| R2818 |
GCCCCAACCGAAATTTTTAAT |
New |
||
| 2 |
2381 |
F2480 |
AAATCTTACCCCGCCTGTTT |
New |
| R4860 |
GAAGAAGCAGGCCGGATGT |
New |
||
| 3 |
2291 |
F4609 |
AAATAAACCCTCGTTCCACAGA |
New |
| R6899 |
CATATTGCTTCCGTGGAGTGTG |
New |
||
| 4 |
2511 |
F6636 |
ATTCTTATCCTACCAGGCTTCG |
New |
| R9146 |
GCGACAGCGATTTCTAGGATAG |
New |
||
| 5 |
2489 |
F8940 |
CCCCATACTAGTTATTATCGAAACC |
New |
|
R11428 |
GGCTTCGACATGGGCTTT |
New |
||
| 6 |
2759 |
F11319 |
CAAACTCCTGAGCCAACAACTT |
New |
|
R14077 |
TTTGGGTTGAGGTGATGATG |
New |
||
| 7 |
2208 |
F13835 |
CAGCCCTAGACCTCAACTACC |
New |
|
R16042 |
CTGCTTCCCCATGAAAGAAC |
[19] |
||
| 8 | 1198 |
F15971 |
TTAACTCCACCATTAGCACC |
[13] |
| R599 | TTGAGGAGGTAAGCTACATA | [13] |
Amplification primer sequences for the eight mtGenome amplicons. The primers for Amplicon 8, which covers the mtDNA CR, were adopted from [13]. The reverse primer for Amplicon 7 (R16042) was previously designed for use as a sequencing primer [19]. All primers except F2480 (Amplicon 2), R4860 (Amplicon 2), R9146 (Amplicon 4) and R14077 (Amplicon 6) are also used for sequencing (see Table 2).