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. 2013 Dec 16;14:881. doi: 10.1186/1471-2164-14-881

Table 1.

Amplification primers

Amplicon number Amplicon size Primer name Primer sequence Source
1
2417
F402
ATCTTTTGGCGGTATGCACTTT
New
R2818
GCCCCAACCGAAATTTTTAAT
New
2
2381
F2480
AAATCTTACCCCGCCTGTTT
New
R4860
GAAGAAGCAGGCCGGATGT
New
3
2291
F4609
AAATAAACCCTCGTTCCACAGA
New
R6899
CATATTGCTTCCGTGGAGTGTG
New
4
2511
F6636
ATTCTTATCCTACCAGGCTTCG
New
R9146
GCGACAGCGATTTCTAGGATAG
New
5
2489
F8940
CCCCATACTAGTTATTATCGAAACC
New
R11428
GGCTTCGACATGGGCTTT
New
6
2759
F11319
CAAACTCCTGAGCCAACAACTT
New
R14077
TTTGGGTTGAGGTGATGATG
New
7
2208
F13835
CAGCCCTAGACCTCAACTACC
New
R16042
CTGCTTCCCCATGAAAGAAC
[19]
8 1198 F15971
TTAACTCCACCATTAGCACC
[13]
R599 TTGAGGAGGTAAGCTACATA [13]

Amplification primer sequences for the eight mtGenome amplicons. The primers for Amplicon 8, which covers the mtDNA CR, were adopted from [13]. The reverse primer for Amplicon 7 (R16042) was previously designed for use as a sequencing primer [19]. All primers except F2480 (Amplicon 2), R4860 (Amplicon 2), R9146 (Amplicon 4) and R14077 (Amplicon 6) are also used for sequencing (see Table 2).