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. 2014 Jan 2;8(1):e2604. doi: 10.1371/journal.pntd.0002604

Table 1. Primers used for the cloning of nine Pks domains.

Gene Abbreviation Primers for cloning in pV1J.ns-tPA Enzyme used
Acyl carrier protein type 1 ACP-1 5′-aatAGATCTtgcacacccccgaaa-3′ 5′-attAGATCTtcatgtggggtgatcg-3′ Bgl II
Acyl carrier protein type 2 ACP-2 5′-aatAGATCTtggatcaagccgcatc-3′ 5′-gccAGATCTtcagggtgtg-3′ Bgl II
Acyl carrier protein type 3 ACP-3 5′-aatAGATCTtgcacacccccgaaa-3′ 5′-attAGATCTtcaggtgtgcaggtgttg-3′ Bgl II
Type 1 acyltransferase with acetate specificity ATac-1 5′-tacTGATCAtgcgtctgtaccagcatctc-3′ 5′-gtaTGATCATcaatagtcaggtgaggcgagtt-3′ Bcl I
Type 2 acyltransferase with acetate specificity ATac-2 5′-tatAGATCTtgtttgtgccctgggtgatttc-3′ 5′-tgaAGATCTtcagtggtccacccagtaac-3′ Bgl II
Acyltransferase with propionate specificity ATp 5′-atcTGATCAtggcagtgggtgtactgg-3′ 5′-gatTGATCAtcacattgtggtggtgtcgt-3′ Bcl I
Enoylreductase ER 5′-tacGGATCCtgcttgacaccaccggcaa-3′ 5′-gatGGATCCtcacatgtcacgtaaggccg-3′ BamH I
Type A ketoreductase domain KR A 5′-aatAGATCTtgagggggaccgtgt-3′ 5′-attAGATCTtcaggcgagcgaatc-3′ Bgl II
Load module ketosynthase domain KS 5′-ggccggtgAGATCTtgaattt-3′ 5′-attAGATCTtcagccacccatggaa-3′ Bgl II

Primers used for the cloning of nine Pks domains in plasmid pV1J.ns-tPA. Restriction enzymes used are indicated. Sense primers are listed first and antisense primers second, within primer pairs. All restriction sites are shown in bold.