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. 2013 Nov 26;5(12):2440–2448. doi: 10.1093/gbe/evt194

Table 2.

GGGPS Genes are Absent from DM Prokaryotes and Actinobacteria

HisF
D-Proteobacteria KNGFDLGVTRAISDALGIPVIASGGVGNLQH
D-Proteobacteria KSGFDLELTRAVSDAVPVPVIASGGVGNLQH
D-Cyanobacteria QAGYDLELTRAVAQAVPVPVIASGGAGCLDH
D-Deino-Thermus RAGFDLEATRAVAREVDLPVIASGGAGKVQD
D-Other DM Proks KDGYDIELNRAISEAVNIPVIASGGAGKKEH
A-Actinobacteria KAGFDLALLRAVRAAVTVPVIASGGAGAVEH
F-Bacilli KNGYDLRLTEEISKSVSVPVIASGGCGHADH
F-Clostridia KDGYDIELTRTVSENVKIPVIASGGAGKMEH
R-Halobacteria KDGYDIPLMKAVCDTVSTPVIASSGCGSPED
R-Thermoplasmata KKGFDTDLIRKITGSVNIPVIASGGAGSPED
R-Thermoprotei RLGYDLELTRKIVDSVNIPVIASGGAGKMEH
GGGPS
D-Proteobacteria -------------------------------
D-Proteobacteria -------------------------------
D-Cyanobacteria -------------------------------
D-Deino-Thermus --------- Genes absent ---------
D-Other DM Proks -------------------------------
A-Actinobacteria -------------------------------
B-Bacilli MLGDIEAVKKTKAVLETSTLFYGGGIKDAET
C-Clostridia RFGDPAWVGAAAGAMRGARLFYGGGIGTAEQ
B-Bacilli IYGDVSKVQAVSEHLTETQLFYGGGISSEQQ
R-Halobacteria MFGDTEKVQAAHDALDDATLFYGGGIRDYDA
R-Archaeoglobus IYGNPELVAEVKKVLDKARLFYGGGIDSREK
R-Methanobacter PEHVPEEMIALVKRCTDQILIVGGGIRSGED
E-Methanocaldoc SYPVNNETIALSKKLSGINIIVGGGIRKPEI
E-Pyrococcus PEPVPEEMVRVVKSVIDVPLIVGGGIKSGEQ