Skip to main content
. Author manuscript; available in PMC: 2014 Sep 3.
Published in final edited form as: Circulation. 2013 Sep 3;128(10):10.1161/CIRCULATIONAHA.113.005350. doi: 10.1161/CIRCULATIONAHA.113.005350

Table 1.

Genetic loci associated with coronary artery disease and/or myocardial infarction

Band rs-number Gene(s) Risk allele Risk allele frequency OR (95% CI) p-Value Reference (examples)
1p13.3 rs599839 SORT1 A 0.77 1.29 (1.18-1.40)7 4.05 × 10−9 7, 17, 22
1p32.2 rs17114036 PPAP2B A 0.91 1.17 (1.13-1.22)17 3.81 × 10−19 17
1p32.3 rs11206510 PCSK9 T 0.81 1.15 (1.10-1.21)22 9.6 × 10−9 22
1q21.3 rs4845625 IL6R T 0.47 1.04 (1.02-1.07)20 3.55 × 10−8 20
1q41 rs17465637 MIA3 C 0.72 1.14 (1.10-1.19)22 1.4 × 10−9 7, 17, 22
2p11.2 rs1561198 VAMP5-VAMP8-GGCX A 0.45 1.05 (1.03-1.07)20 4.48 × 10−9 20
2p21 rs6544713 ABCG5-ABCG8 T 0.30 1.06 (1.04-1.09)20 8.72 × 10−10 20, 25, 55
2p24.1 rs2123536 TTC32-WDR35 T 0.39 1.12 (1.08-1.16)19 6.83 × 10−11 19
2p24.1 rs515135 APOB G 0.83 1.08 (1.05-1.11)20 4.80 × 10−10 20
2q22.3 rs2252641 ZEB2-AC074093.1 G 0.46 1.04(1.02-1.06)20 3.66 × 10−8 20
2q33.2 rs6725887 WDR12 C 0.14 1.17 (1.11-1.23)22 1.3 × 10−8 17, 22
3q22.3 rs2306374 MRAS C 0.18 1.12 (1.07-1.16)17 3.34 × 10−8 17, 21
4q31.22 rs1878406 EDNRA T 0.15 1.06 (1.02-1.11)20 2.54 × 10−8 20
4q32.1 rs7692387 GUCY1A3 G 0.81 1.06 (1.03-1.09)20 4.57 × 10−9 19, 20
5q31.1 rs273909 SLC22A4-SLC22A5 C 0.14 1.09 (1.05-1.12)20 1.43 × 10−8 20
6p21.2 rs10947789 KCNK5 T 0.76 1.06 (1.03-1.08)20 1.63 × 10−8 20
6p21.31 rs17609940 ANKS1A G 0.75 1.07 (1.05-1.10)17 1.36 × 10−8 17
6p21.32 rs9268402 C6orf10-BTNL2 G 0.59 1.16 (1.12-1.20)19 2.77 × 10−15 19
6p21.33 rs3869109 HLA-C, HLA-B, HCG27 G 0.55 1 1456* 1.12 × 10−9 56
6p24.1 rs12526453 PHACTR1 C 0.65 1.12 (1.08-1.17) 22 1.3 × 10−9 17, 22
6p24.1 rs6903956 C6orf105 A 0.07 1.65 (1.44-1.90)57 2.55 × 10−13 57
6q23.2 rs12190287 TCF21 C 0.62 1.08 (1.06-1.10)17 1.07 × 10−12 17
6q25.3 rs3798220 LPA C 0.02 1.51 (1.33-1.70)17 3.00 × 10−11 17, 23
6q26 rs4252120 PLG T 0.73 1.06 (1.03-1.09)20 5.00 × 10−9 20
7p21.1 rs2023938 HDAC9 G 0.10 1.07 (1.04-1.11)20 4.94 × 10−8 20
7q22.3 rs10953541 BCAP29 C 0.8 1.08 (1.05-1.11)16 3.12 × 10−8 16
7q32.2 rs11556924 ZC3HC1 C 0.62 1.09 (1.07-1.12)17 9.18 × 10−18 17
8p21.3 rs264 LPL G 0.86 1.05 (1.02-1.08)20 5.06 × 10−9 20
8q24.13 rs2954029 TRIB1 A 0.55 1.04 (1.02-1.06)20 4.53 × 10−8 20, 25
9p21.3 rs1333049 CDKN2A, CDKN2B C 0.47 1.37 (1.26-1.48)7 1.80 × 10−14 7-9
9q34.2 rs579459 ABO C 0.21 1.10 (1.07-1.13)17 4.08 × 10−14 17, 55, 58
10p11.23 rs2505083 KIAA1462 C 0.38 1.07 (1.04-1.09)16 3.87 × 10−8 16, 18
10q11.21 rs1746048 CXCL12 C 0.84 1.17 (1.11-1.24)22 7.4 × 10−9 7, 17, 22
10q23.31 rs1412444 LIPA T 0.42 1.09 (1.07-1.12)16 2.76 × 10−13 16, 25, 59
10q24.32 rs12413409 CYP17A1, CNNM2,NT5C2 G 0.89 1.12 (1.08-1.16)17 1.03 × 10−9 17
11q22.3 rs974819 PDGFD T 0.32 1.07 (1.04-1.09)16 2.41 × 10−9 16
11q23.3 rs964184 ZNF259, APOA5-A4-C3-A1 G 0.13 1.13 (1.10-1.16)17 1.02 × 10−17 17
12q21.33 rs7136259 ATP2B1 T 0.39 1.11 (1.08-1.15)19 5.68 × 10−10 19
12q24.12 rs3184504 SH2B3 T 0.38 1.13 (1.08-1.18)60 8.6 × 10−8 20, 60
13q12.3 rs9319428 FLT1 A 0.32 1.05 (1.03-1.08)20 1.01 × 10−8 20
13q34 rs4773144 COL4A1,COL4A2 G 0.44 1.07 (1.05-1.09)17 3.84 × 10−9 17
14q32.2 rs2895811 HHIPL1 C 0.43 1.07 (1.05-1.10)17 1.14 × 10−10 17
15q25.1 rs3825807 ADAMTS7 A 0.57 1.08 (1.06-1.10)17 1.07 × 10−12 16, 17, 58
15q26.1 rs17514846 FURIN-FES A 0.44 1.05 (1.03-1.08)20 4.49 × 10−10 20
17p11.2 rs12936587 RASD1,SMCR3,PEMT G 0.56 1.07 (1.05-1.09)17 4.45 × 10−10 17
17p13.3 rs216172 SMG6, SRR C 0.37 1.07 (1.05-1.09)17 1.15 × 10−9 17
17q21.32 rs46522 UBE2Z, GIP,ATP5G1, SNF8 T 0.53 1.06 (1.04-1.08)17 1.81 × 10−8 17
19p13.2 rs1122608 LDLR G 0.75 1.15 (1.10-1.20)22 1.9 × 10−9 17, 22
19q13.32 rs2075650 APOE/TOMM40 G 0.14 1.14 (1.09-1.19)25 3.2 × 10−8 20, 25
21q22.11 rs9982601 SLC5A3-MRPS6-KCNE2 T 0.13 1.20 (1.14-1.27)22 6.4 × 10−11 17, 22
*

The 95% confidence interval of the odds ratio was not numerically provided.

In each row, data on rsnumber, gene(s) at the locus, risk allele, risk allele frequency and p-value, were obtained from the same reference as the odds ratio