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. Author manuscript; available in PMC: 2014 Jan 6.
Published in final edited form as: J Parasitol. 2010 Apr 30;96(5):10.1645/GE-2463.1. doi: 10.1645/GE-2463.1

Table 1.

Microsatellite locus information

Pooling
Group

Locus

Reference
Dye used Repeat unit Size Range
(nt)
Alleles Observed (Gene Diversity)*
CWRU BRI PR-1
1 SMMS2 Silva et al., 2006 FAM CAAA 212 – 235 2 (2.0) 2 (1.8) 2 (2.0)
SMMS13 Silva et al., 2006 ROX ATT 183 – 189 3 (2.0) 2 (1.2) 2 (1.5)
SMMS16 Silva et al., 2006 HEX ATT 215 – 227 5 (3.9) 5 (4.1) 3 (1.1)

2 SMMS3 Silva et al., 2006 FAM AAT 179 – 207 7 (4.1) 5 (1.7) 6 (3.0)
SMMS17 Silva et al., 2006 HEX AAT 289 – 298 4 (3.0) 4 (2.4) 2 (1.1)
SMMS18 Silva et al., 2006 JOE AAT 204 – 228 8 (4.0) 5 (2.2) 2 (1.1)
SMMS21 Silva et al., 2006 ROX ATT 177 – 180 2 (2.0) 2 (1.0) 1 (1.0)

3 SmBR-8 Rodrigues et al., 2007 FAM AAT 204 – 237 12 (10.2) 9 (7.6) 11 (6.8)
SmBR-13 Rodrigues et al., 2007 HEX CTAT 202 – 246 12 (8.4) 6 (3.1) 8 (2.7)
SMD43 Curtis et al., 2001 ROX GATA 145 – 181 7 (3.4) 6 (3.6) 4 (2.0)
SMDO11 Curtis et al., 2001 ROX GATA 314 – 394 17 (6.6) 7 (3.1) 5 (2.1)

4 13TAGA Rodrigues et al., 2002 FAM GATA 103 – 143 9 (4.1) 8 (3.0) 3 (1.5)
SMDA23 Curtis et al., 2001 NED GATA 197 – 233 7 (6.3) 6 (1.8) 3 (2.1)
1F8A This study VIC ATT 151 – 166 6 (3.4) 4 (2.2) 3 (1.2)

Total Alleles (Average Diversity) 101 (3.8) 71 (2.6) 55 (2.0)
*

Allele counts and diversity measures are maximum values over the observed time.

Alleles with a frequency of greater than 1% at a given time point were counted.