Table 1.
Microsatellite locus information
| Pooling Group |
Locus |
Reference |
Dye used | Repeat unit | Size Range (nt) |
Alleles Observed (Gene Diversity)* |
||
|---|---|---|---|---|---|---|---|---|
| CWRU | BRI | PR-1 | ||||||
| 1 | SMMS2 | Silva et al., 2006 | FAM | CAAA | 212 – 235 | 2 (2.0) | 2 (1.8) | 2 (2.0) |
| SMMS13 | Silva et al., 2006 | ROX | ATT | 183 – 189 | 3 (2.0) | 2 (1.2) | 2 (1.5) | |
| SMMS16 | Silva et al., 2006 | HEX | ATT | 215 – 227 | 5 (3.9) | 5 (4.1) | 3 (1.1) | |
| 2 | SMMS3 | Silva et al., 2006 | FAM | AAT | 179 – 207 | 7 (4.1) | 5 (1.7) | 6 (3.0) |
| SMMS17 | Silva et al., 2006 | HEX | AAT | 289 – 298 | 4 (3.0) | 4 (2.4) | 2 (1.1) | |
| SMMS18 | Silva et al., 2006 | JOE | AAT | 204 – 228 | 8 (4.0) | 5 (2.2) | 2 (1.1) | |
| SMMS21 | Silva et al., 2006 | ROX | ATT | 177 – 180 | 2 (2.0) | 2 (1.0) | 1 (1.0) | |
| 3 | SmBR-8 | Rodrigues et al., 2007 | FAM | AAT | 204 – 237 | 12 (10.2) | 9 (7.6) | 11 (6.8) |
| SmBR-13 | Rodrigues et al., 2007 | HEX | CTAT | 202 – 246 | 12 (8.4) | 6 (3.1) | 8 (2.7) | |
| SMD43 | Curtis et al., 2001 | ROX | GATA | 145 – 181 | 7 (3.4) | 6 (3.6) | 4 (2.0) | |
| SMDO11 | Curtis et al., 2001 | ROX | GATA | 314 – 394 | 17 (6.6) | 7 (3.1) | 5 (2.1) | |
| 4 | 13TAGA | Rodrigues et al., 2002 | FAM | GATA | 103 – 143 | 9 (4.1) | 8 (3.0) | 3 (1.5) |
| SMDA23 | Curtis et al., 2001 | NED | GATA | 197 – 233 | 7 (6.3) | 6 (1.8) | 3 (2.1) | |
| 1F8A | This study | VIC | ATT | 151 – 166 | 6 (3.4) | 4 (2.2) | 3 (1.2) | |
| Total Alleles (Average Diversity) | 101 (3.8) | 71 (2.6) | 55 (2.0) | |||||
Allele counts and diversity measures are maximum values over the observed time.
Alleles with a frequency of greater than 1% at a given time point were counted.