Table 2.
Parameter values of 67 SSR polymorphisms in seven pear genotypes
SSR locus | Size ranged in pears (bp) | Number of alleles | na | ne | h | I |
---|---|---|---|---|---|---|
NAUpy35c | 130–160 | 6 | 1.86 | 1.37 | 0.25 | 0.40 |
NAUpy91b | 130–160 | 4 | 1.86 | 1.67 | 0.36 | 0.53 |
NAUpy74v | 110–115 | 5 | 1.29 | 1.20 | 0.12 | 0.17 |
NAUpy23f | 147–230 | 4 | 2.00 | 1.44 | 0.29 | 0.46 |
NAUpy74f | 110–125 | 3 | 2.00 | 1.44 | 0.28 | 0.44 |
NAUpy39h | 100–110 | 5 | 2.00 | 1.19 | 0.16 | 0.30 |
NAUpy92a | 125–190 | 4 | 2.00 | 1.70 | 0.40 | 0.59 |
NAUpy46k | 125–190 | 5 | 2.00 | 1.19 | 0.16 | 0.30 |
NAUpy55k | 150–166 | 3 | 2.00 | 1.51 | 0.32 | 0.50 |
NAUpy92e | 200–210 | 5 | 2.00 | 1.31 | 0.23 | 0.38 |
NAUpy22c | 210–280 | 2 | 2.00 | 1.80 | 0.43 | 0.62 |
NAUpy24c | 180–230 | 5 | 2.00 | 1.83 | 0.45 | 0.64 |
NAUpy53a | 180–200 | 3 | 1.86 | 1.45 | 0.28 | 0.43 |
NAUpy86n | 220–260 | 4 | 2.00 | 1.44 | 0.29 | 0.46 |
NAUpy32c | 150–180 | 4 | 2.00 | 1.63 | 0.37 | 0.56 |
NAUpy38c | 120–160 | 5 | 2.00 | 1.41 | 0.27 | 0.44 |
NAUpy27c | 100–200 | 4 | 1.86 | 1.37 | 0.25 | 0.40 |
NAUpy31a | 180–240 | 4 | 1.71 | 1.34 | 0.22 | 0.34 |
NAUpy38e | 90–120 | 2 | 1.86 | 1.38 | 0.25 | 0.39 |
NAUpy86c | 200–210 | 2 | 2.00 | 1.66 | 0.37 | 0.55 |
NAUpy87c | 150–160 | 5 | 2.00 | 1.50 | 0.33 | 0.51 |
NAUpy85d | 140–200 | 4 | 1.71 | 1.51 | 0.28 | 0.41 |
NAUpy68n | 110–160 | 3 | 2.00 | 1.81 | 0.44 | 0.63 |
NAUpy02z | 160–190 | 3 | 1.57 | 1.40 | 0.24 | 0.35 |
NAUpy80k | 120–200 | 4 | 2.00 | 1.63 | 0.38 | 0.57 |
NAUpy87d | 190–210 | 5 | 1.71 | 1.37 | 0.23 | 0.35 |
NAUpy43c | 140–160 | 5 | 1.43 | 1.41 | 0.21 | 0.29 |
NAUpy60e | 100–110 | 6 | 1.57 | 1.40 | 0.24 | 0.35 |
NAUpy75t | 95–180 | 4 | 2.00 | 1.73 | 0.41 | 0.60 |
NAUpy91t | 110–150 | 4 | 2.00 | 1.69 | 0.40 | 0.59 |
NAUpy88x | 120–200 | 2 | 1.86 | 1.62 | 0.35 | 0.50 |
NAUpy67t | 90–120 | 3 | 2.00 | 1.52 | 0.32 | 0.50 |
NAUpy98x | 100–150 | 3 | 2.00 | 1.88 | 0.46 | 0.65 |
NAUpy36t | 100–150 | 3 | 1.71 | 1.46 | 0.27 | 0.40 |
NAUpy30u | 180–260 | 4 | 1.86 | 1.59 | 0.34 | 0.50 |
NAUpy62u | 180–220 | 4 | 2.00 | 1.49 | 0.33 | 0.51 |
NAUpy43w | 90–110 | 4 | 1.71 | 1.61 | 0.32 | 0.46 |
NAUpy40c | 220–250 | 4 | 2.00 | 1.66 | 0.37 | 0.55 |
NAUpy85c | 110–170 | 4 | 2.00 | 1.70 | 0.39 | 0.57 |
NAUpy89c | 150–160 | 4 | 1.86 | 1.37 | 0.26 | 0.41 |
NAUpy94x | 160–180 | 3 | 1.86 | 1.53 | 0.32 | 0.47 |
NAUpy23d | 160–180 | 2 | 1.86 | 1.53 | 0.32 | 0.47 |
NAUpy07u | 180–210 | 4 | 2.00 | 1.59 | 0.36 | 0.54 |
NAUpy35v | 130–150 | 4 | 2.00 | 1.48 | 0.31 | 0.48 |
NAUpy92x | 110–120 | 4 | 1.71 | 1.39 | 0.24 | 0.37 |
NAUpy81m | 140–150 | 4 | 1.57 | 1.40 | 0.24 | 0.35 |
NAUpy71v | 120–135 | 4 | 2.00 | 1.63 | 0.37 | 0.56 |
NAUpy48t | 130–160 | 4 | 2.00 | 1.50 | 0.33 | 0.51 |
NAUpy29u | 130–160 | 4 | 1.57 | 1.47 | 0.25 | 0.36 |
NAUpy41v | 130–150 | 4 | 1.86 | 1.43 | 0.28 | 0.43 |
NAUpy33v | 110–140 | 3 | 2.00 | 1.49 | 0.33 | 0.51 |
NAUpy13d | 120–140 | 4 | 1.86 | 1.37 | 0.25 | 0.40 |
NAUpy85x | 120–155 | 6 | 1.86 | 1.57 | 0.34 | 0.50 |
NAUpy98s | 160–200 | 6 | 2.00 | 1.75 | 0.43 | 0.62 |
NAUpy28d | 170–210 | 4 | 1.71 | 1.51 | 0.30 | 0.43 |
NAUpy31t | 100–150 | 6 | 1.71 | 1.51 | 0.30 | 0.43 |
NAUpy66w | 100–120 | 4 | 1.71 | 1.46 | 0.27 | 0.40 |
NAUpy30d | 200–220 | 6 | 2.00 | 1.51 | 0.33 | 0.51 |
NAUpy90w | 180–240 | 6 | 2.00 | 1.31 | 0.23 | 0.38 |
NAUpy73m | 110–130 | 4 | 2.00 | 1.36 | 0.26 | 0.42 |
NAUpy35d | 150–160 | 3 | 2.00 | 1.31 | 0.23 | 0.38 |
NAUpy30c | 220–250 | 6 | 2.00 | 1.48 | 0.31 | 0.47 |
NAUpy06z | 120–200 | 4 | 2.00 | 1.66 | 0.38 | 0.56 |
NAUpy06d | 200–220 | 6 | 2.00 | 1.54 | 0.34 | 0.52 |
NAUpy58t | 130–150 | 6 | 2.00 | 1.48 | 0.31 | 0.48 |
NAUpy45f | 120–170 | 5 | 2.00 | 1.44 | 0.29 | 0.46 |
NAUpy56h | 170–200 | 4 | 2.00 | 1.51 | 0.32 | 0.50 |
Average | 4.14 | 1.89 | 1.51 | 0.31 | 0.46 |
Observed sizes—size range on 8 % high-resolution non-denaturing polyacrylamide gel. Number of alleles—total numbers observed in seven pear genotypes
na observed number of alleles, ne effective number of alleles [Kimura and Crow (1964)], h Nei’s (1973) gene diversity, I Shannon’s information index [Lewontin (1972)]