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. Author manuscript; available in PMC: 2014 Nov 1.
Published in final edited form as: J Chem Theory Comput. 2013 Sep 19;9(11):10.1021/ct400654r. doi: 10.1021/ct400654r

Figure 1.

Figure 1

Fractional helicity for each residue of GCN4 bZip domain observed in four 100 ns MD trajectories initiated from starting structures with varying degrees of helicity. Helical conformations were assigned for each MD snapshot using the program STRIDE. Helix populations predicted from the experimental chemical shifts using the δ2D program are shown as a dotted line. The sequence of the GCN4 bZip domain is displayed above the graph with residues in the basic region colored blue and residues in the leucine zipper colored red.