Table 2.
Gene | P -value a | KO b | COG | Pathway | Enrichment c | Function |
---|---|---|---|---|---|---|
alaS |
0.000 |
K01872 |
J |
ko00970 |
0.3094 |
Alanyl-tRNA synthetase |
cobU |
0.046 |
K02231 |
H |
ko00860 |
0.6536 |
Bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase |
dacC |
0.024 |
K07258 |
M |
ko00550 |
0.6806 |
D-alanyl-D-alanine carboxypeptidase |
eutA |
0.000 |
K04019 |
E |
ko00564 |
0.6025 |
Reactivating factor for ethanolamine ammonia lyase |
fliC |
0.000 |
K02406 |
N |
ko02020 |
0.1939 |
Flagellar filament structural protein |
hchA |
0.000 |
K05523 |
R |
- |
- |
Hsp31 molecular chaperone |
nfsA |
0.000 |
K07734 |
K |
- |
- |
Nitroreductase A |
pgl |
0.000 |
K07404 |
G |
ko00030 |
0.3210 |
6-phosphogluconolactonase |
yadB |
0.000 |
K01894 |
J |
- |
- |
Glutamyl-Q tRNA synthetase |
yebN |
0.000 |
- |
S |
- |
- |
Conserved inner membrane protein |
yddV |
0.000 |
K13069 |
T |
- |
- |
Predicted diguanylate cyclase |
yfdF |
0.041 |
- |
- |
- |
- |
Hypothetical protein |
ygfI |
0.013 |
- |
K |
- |
- |
Putative DNA-binding transcriptional regulator |
ygeR | 0.000 | K12943 | M | - | - | Lipoprotein |
a The P-value shown is the smallest one among different fragments if there is a strong signal of recombination.
b “-” indicates that no functional term was assigned.
c The “enrichment” represents P-value of hypergeometric distribution for each KEGG pathway.