Table 3.
Gene a | P -value b | KO c | COG c | Function |
---|---|---|---|---|
ampC |
0.000 |
K01467 |
V |
β-lactamase |
ubiE |
0.000 |
- |
H |
SAM-dependent methyltransferase |
rluA |
0.000 |
- |
J |
Ribosomal large subunit pseudouridylate synthase D |
glpF |
0.000 |
- |
G |
Glycerol uptake facilitator protein |
flgL |
0.000 |
- |
N |
Flagellin |
pbp2 |
0.000 |
- |
M |
Penicillin-binding protein |
paiB |
0.000 |
K07734 |
K |
Protease synthase and sporulation negative regulatory protein |
araJ |
0.000 |
- |
G |
ABC transporter |
baeS |
0.000 |
- |
T |
Sensor histidine kinase |
afuB |
0.000 |
K02011 |
P |
Iron (III) transport system permease protein |
ptr2 |
0.000 |
- |
E |
Multidrug resistance protein |
ahpF |
0.000 |
K03387 |
O |
Alkyl hydroperoxide reductase, subunit F |
COG3708 |
0.000 |
- |
S |
Transcriptional regulator, AraC family |
gcd1 |
0.000 |
K00966 |
MJ |
GMPP; mannose-1-phosphate guanylyltransferase |
COG4653 |
0.000 |
- |
R |
Putative prophage LambdaBa04, major capsid protein |
rsuA |
0.000 |
K06183 |
J |
RNA pseudouridine synthase family protein |
purR |
0.000 |
- |
K |
Sugar-binding transcriptional regulator, LacI family |
cwlA |
0.000 |
K01447 |
M |
N-acetylmuramoyl-L-alanine amidase |
ntrB |
0.000 |
K00936 |
T |
Sporulation kinase |
COG1079 |
0.000 |
- |
R |
ABC transporter, permease |
rnj |
0.000 |
K12574 |
R |
RNA-metabolising metallo-beta-lactamase |
COG3127 |
0.000 |
- |
Q |
ABC transporter, permease |
COG1979 |
0.000 |
K00100 |
C |
Alcohol dehydrogenase |
fepD |
0.000 |
K02015 |
P |
Iron complex transport system permease protein |
nupC | 0.000 | K03317 | F | Nucleoside permease NupC |
More details are available at http://202.120.45.186/~webserver/kaks/detail.php?jobId=UrK5YPUZE1.
a Only the genes, which have clear function, were listed in this table.
b The P-value shown is the smallest one among different fragments if there is a strong signal of recombination.
c “-” indicates that no functional term was assigned.