Table 4.
Polymorphic sites in the promoter region of GmRCAβ
| Position | Polymorphic type | Regulatory element change | Function of cis-elements | Frequency (%) |
|---|---|---|---|---|
| –2166 | T/A | – | – | 1.46 |
| –2144 | 1-base indel | TATA box | Core promoter element around –30 of transcription start | 67.48 |
| –2033 | T/G | – | – | 4.85 |
| –1930 | 18-base indel | AT1 motif | Part of a light-responsive module | 67.48 |
| TATA box | Core promoter element around –30 of transcription start | |||
| –1884 | A/G | – | – | 67.48 |
| –1871 | A/G | ARE | cis-Acting regulatory element essential for anaerobic induction | 67.48 |
| –1806 | C/T | – | – | 0.97 |
| –1719 | A/G | – | – | 67.48 |
| –1696 | 1-base indel | – | – | 67.48 |
| –1625 | T/G | – | – | 68.93 |
| –1226 | A/G | – | – | 1.46 |
| –1158 | A/T | GAG motif | Part of a light responsive element | 68.93 |
| –953 | C/T | – | – | 67.48 |
| –727 | 13-base indel | – | – | 68.93 |
| –573 | A/G | TATA box | Core promoter element around –30 of transcription start | 68.93 |
| –311 | A/T | – | – | 1.46 |
–, not located in regulatory elements.