Table 3. Summary data for SNVs in positions identified in both WGA and unamplified sequence data, and using only one of the two methods.

Patient-ID	Number of SNV
	WGA	Shared	Unamplified
118	722 (6%)	10985 (73%)	3260 (23%)
140	759 (6%)	11781 (81%)	1953 (14%)
210	1099 (9%)	11413 (75%)	2715 (19%)
247	1964 (17%)	9483 (59%)	4591 (33%)
255	606 (5%)	11162 (78%)	2615 (19%)
278	861 (7%)	12250 (84%)	1535 (11%)
295	650 (5%)	11464 (77%)	2716 (19%)
322	3866 (26%)	10821 (61%)	3023 (22%)
396	2076 (17%)	10151 (71%)	2119 (17%)
412	1559 (11%)	12216 (81%)	1374 (10%)
421	1204 (9%)	12108 (78%)	2133 (15%)
541	1398 (9%)	13350 (75%)	3096 (19%)
Average (%)	1397 (9%)	11432 (74%)	2594 (17%)
StDev	923	1028	872