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. Author manuscript; available in PMC: 2014 Sep 1.
Published in final edited form as: Obesity (Silver Spring). 2013 Aug 13;22(3):875–881. doi: 10.1002/oby.20517

Table 2.

SNP and corresponding risk alleles used to calculate genetic risk score (GRS) based on Speltiotes et al, 2010

SNP Nearest gene Risk allele Frequency of risk allele in Fels Longitudinal Study
rs10150332 NRXN3 C 0.22
rs10767664 BDNF A 0.81
rs10938397 GNPDA2 G 0.41
rs10968576 LRRN6C G 0.31
rs11847697 PRKD1 T 0.03
rs12444979 GPRC5B C 0.85
rs13078807 CADM2 G 0.19
rs13107325 SLC39A8 T 0.05
rs1514175 TNNI3K A 0.43
rs1555543 PTBP2 C 0.61
rs1558902 FTO A 0.39
rs206936 NUDT3 G 0.22
rs2112347 FLJ35779 T 0.64
rs2241423 MAP2K5 G 0.77
rs2287019 QPCTL C 0.80
rs2815752 NEGR1 A 0.63
rs2867125 TMEM18 C 0.84
rs2890652 LRP1B C 0.14
rs29941 KCTD15 G 0.68
rs3810291 TMEM160 A 0.68
rs3817334 MTCH2 T 0.38
rs4771122 MTIF3 G 0.25
rs4836133 ZNF608 A 0.45
rs4929949 RPL27A C 0.51
rs543874 SEC16B G 0.18
rs571312 MC4R A 0.25
rs713586 RBJ C 0.48
rs7138803 FAIM2 A 0.35
rs7359397 SH2B1 T 0.40
rs887912 FANCL T 0.29
rs9816226 ETV5 T 0.79
rs987237 TFAP2B G 0.18