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. 2014 Jan 9;9(1):e84808. doi: 10.1371/journal.pone.0084808

Table 1. Equilibrium dissociation constants (KD) for binding of NNIs to Δ21 and fold-shifts in KD for association to Δ55 and Δ21-Δ8 determined by SPR.

KD (nM)a Fold shift from Δ21b
Site Inhibitor Δ21 Δ55 Δ21-Δ8
Thumb site I B 11.7 1.0 1.6
Thumb site II GS-9669 1.6 5.5 1.7
Thumb site II Lomibuvir 3.3 9.0 2.0
Thumb site II Filibuvir 38.2 9.3 2.4
Palm site I A-837093 0.04 433 n/ac
Palm site II HCV-796 174.0 n/ac n/ac

a Sensorgrams for the binding of NNIs to Δ21, Δ55 and Δ21-Δ8 along with a table of equilibrium and kinetic parameters of interaction are shown in Figure S2 and Table S1 in File S1, respectively.

b Fold shift in KD for association of NNIs to Δ55 and Δ21-Δ8 was calculated relative to the KD determined for binding towards Δ21.

c Where KD values could not be obtained either due to complex binding kinetics (Palm Site II inhibitor binding to Δ55 and Δ21-Δ8) or super-stoichiometric binding (Palm Site I inhibitor binding to Δ21-Δ8), numerical values have been replaced by n/a (not applicable).