Table 4. Normalized protein counts highlighting changes in subcellular localization composition in samples mCW and sCW.
mCW-P2
|
mCW-P3
|
sCW-P2
|
sCW-P3
|
mCW | sCW | |||||
---|---|---|---|---|---|---|---|---|---|---|
Proteins | % total | Proteins | % total | Proteins | % total | Proteins | % total | change | change | |
Golgi | 84 | 8.6 | 66 | 7.4 | 59 | 8.2 | 48 | 7.1 | + | |
trafficking | 85 | 8.7 | 106 | 11.9 | 68 | 9.4 | 64 | 9.5 | ||
ER | 37 | 3.8 | 48 | 5.4 | 46 | 6.4 | 39 | 5.8 | + | |
endomembrane | 66 | 6.7 | 70 | 7.9 | 69 | 9.6 | 76 | 11.3 | + | |
vacuole | 3 | 0.3 | 9 | 1.0 | 5 | 0.7 | 1 | 0.1 | ||
PM | 55 | 5.6 | 64 | 7.2 | 48 | 6.7 | 46 | 6.8 | ||
extracellular | 10 | 1.0 | 10 | 1.1 | 8 | 1.1 | 0 | 0 | ||
structural | 19 | 1.9 | 22 | 2.5 | 13 | 1.8 | 14 | 2.1 | ||
cytosol | 154 | 15.7 | 128 | 14.4 | 90 | 12.5 | 94 | 14.0 | ||
mitochondria | 142 | 14.5 | 82 | 9.2 | 79 | 11.0 | 66 | 9.8 | + | |
plastid | 36 | 3.7 | 30 | 3.4 | 26 | 3.6 | 26 | 3.9 | ||
peroxisome | 21 | 2.1 | 13 | 1.5 | 12 | 1.7 | 15 | 2.2 | ||
nucleus | 11 | 1.1 | 9 | 1.0 | 11 | 1.5 | 11 | 1.6 | + | |
translation | 115 | 11.7 | 79 | 8.9 | 113 | 15.7 | 106 | 15.8 | ++ | |
miscellaneous | 142 | 14.5 | 154 | 17.7 | 73 | 10.1 | 67 | 10.0 | ++ | |
Total identifications | 980 | 890 | 720 | 673 |