Table 1.
Chromosomal distribution and copy numbers of HERV family in humans and great apes
| Chr | HERV-H / solitary LTR | HERV-R / solitary LTR | HERV-W / solitary LTR | HERV-K / solitary LTR | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Hu | Ch | Or | Hu | Ch | Or | Hu | Ch | Or | Hu | Ch | Or | |
| 1 | 25 / 54 | 22 / 33 | 21 / 40 | 6 / 8 | 9 / 4 | 6 / 15 | 13 / 11 | 10 / 10 | 12 / 7 | 88 / 79 | 72 / 78 | 60 / 63 |
| 2 | 28 / 46 | 16 / 27 | 13 / 26 | 3 / 10 | 7 / 11 | 0 / 8 | 13 / 24 | 20 / 12 | 18 / 12 | 51 / 67 | 26 / 52 | 28 / 44 |
| 3 | 24 / 64 | 23 / 39 | 25 / 41 | 1 / 9 | 6 / 5 | 1 / 8 | 19 / 15 | 14 / 24 | 14 / 19 | 57 / 47 | 71 / 72 | 70 / 69 |
| 4 | 20 / 58 | 8 / 25 | 12 / 18 | 0 / 7 | 2 / 2 | 3 / 2 | 15 / 21 | 5 / 14 | 4 / 6 | 81 / 70 | 29 / 56 | 35 / 48 |
| 5 | 13 / 29 | 13 / 33 | 15 / 26 | 0 / 2 | 2 / 4 | 0 / 4 | 6 / 15 | 18 / 9 | 16 / 13 | 41 / 54 | 49 / 56 | 57 / 55 |
| 6 | 24 / 49 | 10 / 18 | 11 / 19 | 0 / 4 | 7 / 6 | 1 / 9 | 15 / 9 | 5 / 22 | 5 / 20 | 69 / 63 | 25 / 48 | 41 / 46 |
| 7 | 14 / 27 | 8 / 43 | 8 / 30 | 2 / 7 | 0 / 3 | 0 / 1 | 7 / 15 | 6 / 7 | 7 / 3 | 37 / 46 | 61 / 40 | 51 / 43 |
| 8 | 8 / 44 | 12 / 11 | 11 / 9 | 0 / 1 | 0 / 2 | 0 / 1 | 6 / 5 | 3 / 8 | 7 / 5 | 79 / 44 | 17 / 41 | 28 / 39 |
| 9 | 8 / 14 | 10 / 13 | 8 / 9 | 0 / 1 | 3 / 2 | 0 / 1 | 3 / 7 | 4 / 12 | 4 / 10 | 19 / 40 | 21 / 32 | 16 / 25 |
| 10 | 16 / 22 | 9 / 17 | 12 / 16 | 1 / 2 | 3 / 6 | 1 / 10 | 5 / 12 | 6 / 9 | 6 / 8 | 33 / 35 | 39 / 28 | 46 / 21 |
| 11 | 16 / 23 | 13 / 19 | 10 / 18 | 5 / 7 | 11 / 3 | 3 / 2 | 6 / 6 | 12 / 10 | 9 / 16 | 56 / 32 | 38 / 35 | 36 / 31 |
| 12 | 12 / 25 | 11 / 17 | 8 / 14 | 3 / 4 | 1 / 4 | 0 / 3 | 12 / 13 | 7 / 8 | 5 / 9 | 46 / 36 | 19 / 16 | 25 / 18 |
| 13 | 9 / 25 | 14 / 9 | 9 / 16 | 0 / 7 | 4 / 4 | 0 / 4 | 4 / 12 | 5 / 6 | 6 / 4 | 16 / 23 | 23 / 44 | 32 / 46 |
| 14 | 7 / 21 | 9 / 19 | 6 / 13 | 0 / 6 | 0 / 4 | 0 / 5 | 3 / 9 | 5 / 6 | 4 / 11 | 20 / 34 | 12 / 23 | 20 / 26 |
| 15 | 6 / 7 | 5 / 14 | 6 / 13 | 0 / 1 | 0 / 5 | 1 / 6 | 4 / 6 | 5 / 8 | 4 / 7 | 20 / 14 | 21 / 34 | 19 / 32 |
| 16 | 9 / 19 | 3 / 8 | 3 / 6 | 1 / 3 | 0 / 0 | 0 / 0 | 0 / 0 | 4 / 5 | 2 / 4 | 19 / 27 | 17 / 13 | 23 / 17 |
| 17 | 2 / 7 | 6 / 9 | 3 / 3 | 0 / 4 | 1 / 5 | 1 / 6 | 2 / 3 | 0 / 0 | 0 / 0 | 17 / 20 | 15 / 26 | 11 / 16 |
| 18 | 2 / 16 | 2 / 4 | 4 / 7 | 0 / 3 | 0 / 5 | 0 / 4 | 2 / 5 | 2 / 4 | 1 / 0 | 5 / 12 | 13 / 21 | 13 / 15 |
| 19 | 10 / 12 | 5 / 13 | 4 / 11 | 5 / 6 | 1 / 3 | 0 / 3 | 2 / 1 | 2 / 8 | 4 / 3 | 84 / 55 | 6 / 6 | 10 / 8 |
| 20 | 1 / 14 | 7 / 6 | 7 / 5 | 0 / 0 | 1 / 4 | 1 / 3 | 2 / 1 | 1 / 1 | 0 / 1 | 12 / 6 | 66 / 53 | 87 / 42 |
| 21 | 0 / 8 | 1 / 9 | 2 / 6 | 0 / 4 | 0 / 0 | 0 / 0 | 3 / 3 | 1 / 2 | 2 / 1 | 1 / 7 | 8 / 7 | 14 / 9 |
| 22 | 3 / 2 | 10 / 3 | 1 / 6 | 0 / 4 | 1 / 5 | 0 / 4 | 0 / 1 | 3 / 3 | 2 / 2 | 9 / 14 | 0 / 8 | 0 / 7 |
| 23 | 2 / 2 | 1 / 2 | 1 / 2 | 0 / 2 | 3 / 1 | 0 / 1 | 5 / 14 | 4 / 8 | ||||
| X | 18 / 59 | 9 / 30 | 16 / 30 | 2 / 16 | 4 / 15 | 2 / 15 | 10 / 15 | 9 / 13 | 0 / 15 | 60 / 60 | 72 / 50 | 70 / 51 |
| Y | 7 / 23 | 7 / 15 | 0 / 19 | 2 / 16 | 12 / 15 | 0 / 15 | 1 / 0 | 1 / 0 | 8 / 0 | 81 / 60 | 137 / 50 | 0 / 51 |
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| Sum | 282 / 668 | 235 / 436 | 216 / 403 | 31 / 132 | 76 / 119 | 20 / 131 | 153 / 209 | 151 / 202 | 140 / 177 | 1001 / 945 | 862 / 903 | 796 / 830 |