Table 3.
Potential targets of identified peach miRNAs
| miRNA family | Targeted genes | Targeted protein | Target function |
|---|---|---|---|
| miR156 | ppa024285m | Probable receptor-like protein kinase | Adjust protein kinase activity |
| ppa005013m | Squamosa promoter-binding-like protein 12-like | Transcription factor (TF) | |
| ppa023657m | Squamosa promoter-binding-like protein 16 | TF | |
| ppa007056m | SPL domain class transcription factor | TF | |
| ppa006611m | SPL domain class transcription factor | TF | |
| ppa021582m | SPL domain class transcription factor | TF | |
| ppa017695m | Squamosa promoter-binding-like protein 6-like | TF | |
| ppa003644m | Squamosa promoter-binding-like protein 6-like | TF | |
| ppa007202m | Squamosa promoter-binding-like protein 16-like | TF | |
| miR159 | ppa003628m | Transcription factor GAMYB | TF |
| miR160 | ppa002710m | Auxin response factor 18 | TF |
| ppa002082m | Auxin response factor 18-like | TF | |
| ppa002195m | Auxin response factor 16 | TF | |
| ppa003136m | Auxin response factor | TF | |
| miR164 | ppa007653m | NAC domain-containing protein | TF |
| miR166 | ppa001405m | HB15 HD-ZipIII transcription factors | TF |
| miR167 | ppa017885m | Pentatricopeptide repeat-containing protein (PPR) | TF |
| miR171 | ppa001781m | GRAS family transcription factor (SCARECROW-like) | TF |
| ppa001561m | GRAS family transcription factor (SCARECROW-like) | TF | |
| miR172 | ppa021782m | Ethylene-responsive transcription factor RAP2-7-like | TF |
| ppa005230m | AP2 domain-containing transcription factor | TF | |
| ppa003783m | AP2 domain class transcription factor | TF | |
| ppa018704m | AP2 domain class transcription factor | TF | |
| miR319 | ppa003628m | Transcription factor GAMYB | TF |
| miR393 | ppa003465m | Protein auxin signalling F-box 3 | TF |
| ppa003344m | Transport inhibitor response 1 protein | TF | |
| miR394 | ppa004699m | F-box family protein | TF |
| miR395 | ppa002425m | Sulphate transporter 2.1-like | Adjusts nutrient balance |
| miR397 | ppa015544m | Laccase-11-like | Oxidoreductase |
| ppa017222m | Laccase-11-like | Oxidoreductase | |
| ppa003590m | Laccase-11-like | Oxidoreductase | |
| ppa003714m | Laccase-17 | Oxidoreductase | |
| ppa003296m | Laccase-2-like | Oxidoreductase | |
| miR399 | ppa025234m | Probable inorganic phosphate transporter 1–3 | Adjusts nutrient balance |
| miR408 | ppa018507m | Uncharacterised protein LOC100305588 precursor | Unknown |
| miR477 | ppa016418m | GRAS family transcription factor | TF |
| ppa026722m | GRAS family transcription factor | TF | |
| ppa025123m | Hypothetical protein | Unknown | |
| miR1030 | ppa000744m | Hypothetical protein | Unknown |
| miR1511 | ppb023395m | Hypothetical protein | Unknown |
| miR2111 | ppa023821m | F-box family protein | TF |
| miR2118 | ppa013258m | Unknown | Unknown |
| miR3629 | ppa018289m | Hypothetical protein | Unknown |