Skip to main content
. 2013 Oct 17;51(1):35–44. doi: 10.1136/jmedgenet-2013-101917

Table 1.

SCN5A paralogues

Paralogue HGMD missense mutations HGMD missense residues SCN5A annotations Major diseases
SCN1A 410 327 393 Epilepsy, Dravet syndrome, Hemiplegic migraine
SCN2A 26 26 24 Epilepsy, Neonatal-infantile seizures
SCN3A 1 1 1 Epilepsy
SCN4A 67 53 67 Hyperkalaemic periodic paralysis, myotonia, paramyotoniacongenita, periodic paralysis
SCN7A 0 0 0
SCN8A 1 1 1 Infantile epileptic encephalopathy
SCN9A 53 50 45 Congenital indifference to pain, primary erythermalgia, paroxysmal extreme pain disorder, Small fibre neuropathy
SCN10A 0 0 0
SCN11A 0 0 0
CACNA1A 63 61 54 Episodic ataxia 2, hemiplegic migraine
CACNA1B 0 0 0
CACNA1C 9 9 4 BrS, LQTS
CACNA1D 1 1 0
CACNA1E 1 1 0
CACNA1F 28 28 27 Night blindness
CACNA1G 2 2 0 Juvenile myoclonic epilepsy
CACNA1H 25 25 13 Epilepsy, autism spectrum disorder
CACNA1I 0 0 0
CACNA1S 13 8 13 Hypokalaemic periodic paralysis, malignant hyperthermia

Nineteen paralogues of SCN5A were used in this study, including voltage-gated sodium channels (SCN-A) and the homologous voltage-gated calcium channels. For each paralogue, the table shows the total number of distinct missense variants reported in HGMD, the number of distinct amino acid residues affected by these mutations and the number of mutations that were mapped to equivalent residues in SCN5A. Some of the most prominent diseases associated with these paralogue mutations are also highlighted: these are typically diseases attributable to abnormalities of membrane excitability in a range of tissues.

BrS, Brugada syndrome; HGMD, Human Gene Mutation Database; LQTS, long QT syndrome.