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. 2013 Dec 26;2013:970435. doi: 10.1155/2013/970435

(b) Highly ranked genes nearby SNPs conferring susceptibility to obesity

Gene symbol Official full name Location Percentage References SNPs
(Chr pos; frequencies)
NCKAP5L NCK-associated protein 5-like Chr12
50,184,929-50,222,208 (−): 12q13.12
63.6% rs7132908
(50,263,148; G = 0.73; A = 0.27)

SP1 Sp1 transcription factor Chr12
53,773,979-53,810,230 (+): 12q13.12
63.6% rs1443512
(54,342,684; A = 0.31; C = 0.69)

ITGA5 Integrin, alpha 5 Chr12
54,789,045-54,813,050 (−): 12q11-q13
58.3% rs1443512
(54,342,684; A = 0.31; C = 0.69)

TOMM5 Translocase of outer mitochondrial membrane 5 Chr9
37,588,410-37,592,636 (−): 9p13.2
57.1% rs16933812
(36,969,205; G = 0.40, T = 0.60)

HSP90AB1 Heat shock protein 90 kDa alpha (cytosolic), class B member 1 Chr6
44,214,849-44,221,614 (+): 6p12
55.6% rs6905288
(43,758,873; G = 0.38, A = 0.62)

BAP1 BRCA1 associated protein-1 Chr3
52,435,024-52,444,009 (−): 3p21.31-p21.2
50% rs6784615
(52,506,426; C = 0.04, T = 0.96)

GRB14 Growth factor receptor-bound protein 14 Chr2
165,349,323-165,478,360 (−): 2q22-q24
50% Cooney et al., 2004 [18]; Holt et al., 2009. [19] rs10195252
(165,513,091; T = 0.60, C = 0.40)

Note: Chr pos: chromosome position; frequencies: the allele frequencies in 1000 genomes (http://www.ncbi.nlm.nih.gov/variation/tools/1000genomes/).

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