Table 1.
RNA target | Sequence typeb | Probe/primer sequencec | Accession no.a |
---|---|---|---|
28S | Probe | 5′-(FAM)-AGGACCGCTACGGACCTCCACCA-(TAMRA)-3′ | X59733 |
F | 5′-GGCGAAGCCAGAGGAAACT-3′ | ||
R | 5′-GACGACCGATTGCACGTC-3′ | ||
IL-1β | Probe | 5′-(FAM)-CCACACTGCAGCTGGAGGAAGCC-(TAMRA)-3′ | AJ245728 |
F | 5′-GCTCTACATGTCGTGTGTGATGAG-3′ | ||
R | 5′-TGTCGATGTCCCGCATGA-3′ | ||
IL-6 | Probe | 5′-(FAM)-AGGAGAAATGCCTGACGAAGCTCTCCA-TAMRA)-3′ | AJ250838 |
F | 5′-GCTCGCCGGCTTCGA-3′ | ||
R | 5′-GGTAGGTCTGAAAGGCGAACAG-3′ | ||
IL-15 | Probe | 5′-(FAM)-CCACCCAATCCAGGAAATGTTAACCCA-(TAMRA)-3′ | NM_204571.1 |
F | 5′-AGCTGAACTGCTGCCACATTT-3′ | ||
R | 5′-TTTCCTCTGTTCTTCTTTGTCTGAATC-3′ | ||
IL-18 | Probe | 5′-(FAM)-CCGCGCCTTCAGCAGGGATG-(TAMRA)-3′ | AJ416937 |
F | 5′-AGGTGAAATCTGGCAGTGGAAT-3′ | ||
R | 5′-ACCTGGACGCTGAATGCAA-3′ | ||
IFN-γ | Probe | 5′-(FAM)-TGGCCAAGCTCCCGATGAACGA-(TAMRA)-3′ | YO7922 |
F | 5′-GTGAAGAAGGTGAAAGATATATCATGGA-3′ | ||
R | 5′-GCTTTGCGTGGATTCTCA-3′ | ||
IFN-α | Probe | 5′-(FAM)-CTCAACCGGATCCACCGCTACACG-(TAMRA)-3′ | U07868 |
F | 5′-GACAGCCAACGCCAAAGC-3′ | ||
R | 5′-GTCGCTGCTGTCCAAGCATT-3′ | ||
CXCLi1 | Probe | 5′-(FAM)-CCACATTCTTGCAGTGAGGTCCGCT-(TAMRA)-3′ | AF277660 |
F | 5′-CCAGTGCATAGAGACTCATTCCAAA-3′ | ||
R | 5′-TGCCCATCTTTCAGAGTAGCTATGAACT-3′ | ||
CXCLi2 | Probe | 5′-(FAM)-CTTTACCAGCGCGTCCTACCTTGCGACA-(TAMRA)-3′ | AJ009800 |
F | 5′-GCCCTCCTCCTGGTTTCAG-3′ | ||
R | 5′-TGGCACCGCCAGCTCATT-3′ |
For the genomic DNA sequence.
F, forward; R, reverse.
FAM, 5-carboxyfluorescein; TAMRA, N,N,N,N′-tetramethyl-6-carboxyrhodamine.