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. 2013 Dec;195(24):5602–5613. doi: 10.1128/JB.00753-13

Table 2.

Overall nucleotide diversity and rates of nonsynonymous and synonymous mutations in mrkD from K. pneumoniae and E. coli isolates

Species and/or clade No. of isolates No. of hot spot residues No. of alleles in:
π/nucleotide dN dS dN/dS Z-test P value
Primary zone External zone
All isolates 100 7 30 12 0.037 0.009 0.142 0.06 <0.0001
K. pneumoniae 86 4 30 6 0.040 0.008 0.159 0.05 <0.0001
E. coli 14 6 3 7 0.008 0.009 0.007 1.29 0.579
Within clade 1 84 7 20 11 0.006 0.004 0.010 0.40 0.007
Within clade 2 5 1 4 0 0.006 0 0.023 0
Within clade 3 11 1 6 1 0.006 0.001 0.021 0.05 0.001
Clade 1
    E. coli 14 6 3 7 0.008 0.009 0.007 1.29 0.579
    K. pneumoniae 70 3 20 5 0.005 0.002 0.011 0.16 0.004