Table 4.
MvLST allelic diversity within clones, based on the 125 study isolates
| Lineage | CC | No. of strains | No. of distinct alleles (allele[s] found) for gene |
No. of MVLSTs | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| actA | clpP | dal | inlA | inlB | inlC | lisR | prfA | ||||
| I | 1 | 25 | 2 (14; 15) | 1 (4) | 1 (5) | 1 (28) | 1 (3) | 2 (1; 4) | 1 (1) | 1 (3) | 3 |
| 2 | 25 | 2 (10; 13) | 1 (4) | 1 (5) | 1 (28) | 1 (4) | 1 (1) | 3 (1; 2; 5) | 1 (2) | 4 | |
| 3 | 5 | 1 (10) | 1 (4) | 1 (5) | 1 (22) | 1 (5) | 1 (4) | 1 (1) | 1 (2) | 1 | |
| 6 | 15 | 2 (10; 12) | 1 (4) | 1 (5) | 1 (29) | 1 (3) | 1 (4) | 1 (3) | 2 (2; 5) | 3 | |
| Others | 10 | 4 (9; 10; 11; 14) | 1 (4) | 1 (4; 5; 6; 7) | 6 (21; 23; 24; 25; 26; 27) | 4 (1; 2; 6; 7) | 3 (2; 3; 4) | 1 (3) | 4 (1; 2; 4; 6) | 7 | |
| II | 7 | 6 | 2 (6; 8) | 1 (2) | 2 (11; 13) | 2 (9; 10) | 2 (10; 13) | 2 (10; 11) | 1 (4) | 2 (7; 9) | 4 |
| 8 | 6 | 1 (4) | 1 (1) | 1 (8) | 2 (14; 15) | 2 (9; 12) | 1 (10) | 1 (4) | 1 (8) | 2 | |
| 9 | 19 | 1 (1) | 1 (2) | 2 (1; 2) | 6 (1; 2; 3; 4; 5; 6) | 1 (8) | 1 (5) | 1 (4) | 1 (8) | 3 | |
| Others | 14 | 7 (1; 2; 3; 4; 5; 6; 7) | 3 (1; 2; 3) | 7 (1; 3; 8; 9; 10; 12; 14) | 11 (4; 7; 8; 11; 12; 13; 16; 17; 18; 19; 20) | 6 (8; 9; 10; 11; 14; 15) | 6 (5; 6; 7; 8; 9; 10) | 2 (4; 6) | 1 (8) | 10 | |