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. Author manuscript; available in PMC: 2014 Aug 13.
Published in final edited form as: J Chem Theory Comput. 2013 Aug 13;9(8):3267–3281. doi: 10.1021/ct400331r

Figure 12.

Figure 12

Comparison of the collapse of WW-Fip35 from the extended confirmation with different magnitudes for the numerical differentiation perturbations. RMSD was computed against the extended confirmation. The other simulations were run with LTMD using different values of ε. The same choice of ε was used for both the blocks and quadratic product.