Table 5.
The ncRNA candidates specifically expressed in dermatophytes
| |
|
|
Genome location |
|
|||
|---|---|---|---|---|---|---|---|
| Name | Len a | Reads | Chromosome | Start | End | Position | Accession |
| Trnc_817 |
188 |
323 |
supercont2.1 |
3719705 |
3719892 |
3′UTR |
KC353054 |
| Trnc_733 |
174 |
1 |
supercont2.1 |
3371115 |
3371288 |
3′UTR |
KC353049 |
| Trnc_2676 |
156 |
2 |
supercont2.4 |
110438 |
110593 |
3′UTR |
KC353213 |
| Trnc_3999 |
178 |
5 |
supercont2.8 |
672734 |
672557 |
3′UTR |
KC353314 |
| Trnc_1167 |
177 |
1 |
supercont2.11 |
544895 |
545071 |
3′UTR |
KC353076 |
| Trnc_2448 |
161 |
1 |
supercont2.3 |
2123075 |
2122915 |
5′UTR |
KC353183 |
| Trnc_4219 |
104 |
1 |
supercont2.9 |
449429 |
449532 |
5′UTR |
KC353335 |
| Trnc_956 |
241 |
2 |
supercont2.10 |
559285 |
559525 |
5′UTR |
KC353063 |
| Trnc_305 |
97 |
579 |
supercont2.1 |
1515685 |
1515781 |
Intron |
KC353018 |
| Trnc_500 |
203 |
1 |
supercont2.1 |
2298649 |
2298447 |
Intron |
KC353035 |
| Trnc_1792 | 251 | 1 | supercont2.2 | 1856556 | 1856806 | Intron | KC353132 |
Lena: the cDNA length of the ncRNAs; Accession is the accession number in GenBank. This table shows the lengths and genomic loci of ten sncRNAs that might be specifically expressed in dermatophytes. These ncRNAs were conserved in all six dermatophytes but have no homologues in NT.