Table 2.
Open reading frames identified in each of the 5 drug resistance-conferring plasmids
| Plasmid | ORF | Predicted protein length | Most similar protein, Genbank accession number | Organism | E-value | AA identity |
|---|---|---|---|---|---|---|
| pAMP |
1 |
95 |
Putative Iron-Chelator Esterase EL859857.1 |
Bacillus Subtilis subsp inaquoaorm |
7 e-55 |
99% |
| pAMP |
2 |
230 |
Putative Sodium Dependent Transporter ZP_2118733.1 |
Bacillus Subtilis subsp inaquoaorm |
2 e-156 |
98% |
| pAMP |
3 |
378 |
Sugar Efflux Transporter YP_001907636.1 |
Erwinia tasmaniensis Et1/99 |
0.00 |
89% |
| pAMP |
4 |
293 |
Extended Sepctrum Beta-lactamase ERP-1 AAAL86999.1 |
Erwinina perscina |
2 e-152 |
81% |
| pAMP |
5 |
303 |
Peptidyl-Dipeptidase YP_001907684.1 |
Erwinia tasmaniensis Et1/99 |
8 e-154 |
86% |
| pCIP |
1 |
216 |
Pentapeptide-Repeat Containing Protein YP_006790167.1 |
Exiguobacterium antarticum |
9 e-139 |
86% |
| pCIP |
2 |
212 |
Beta-lactamase Domain Containing Protein YP_006790168 |
Exiguobacterium antarticum |
1 e-144 |
96% |
| pTMP |
1 |
128 |
Diemethyladenoanine Transferase YP_001906668.1 |
Erwinia tasmanienaia |
1 e-82 |
94% |
| pTMP |
2 |
125 |
Protein ApaG (Protein Cor D) YP_003532282.1 |
Erwinia amylovora CFBP1430 |
2 e- 78 |
88% |
| pTMP |
3 |
234 |
Bis (5′-nucleoayl) Tetraphosphotase YP_003740080.1 |
Erwinia billingiae |
4 e- 151 |
88% |
| pTMP |
4 |
171 |
Protein FolA YP_ 005801502.1 |
Erwinia pyrifoliae DSM 12163 |
3 e-115 |
93% |
| pTMP |
5 |
91 |
Rhtb Family Transporter YP_003532285.1 |
Erwinina amylovora CFB1430 |
9 e-54 |
97% |
| pAZT |
1 |
151 |
Hypothetical Protein BsI_26310 ZP_21117554.1 |
Bacillus Subtilis subsp inaquoaorm |
2 e-108 |
99% |
| pAZT |
2 |
651 |
Penicillin Binding Protein 2c ZP_21117553.1 |
Bacillus Subtilis |
0.00 |
99% |
| pSXT |
1 |
170 |
Dihydrofolate Reductase YP_002875292.1 |
Pseudomonas fluorsencens |
4 e-112 |
94% |
| pSXT | 2 | 139 | Sodium: Dicarboxylate Symporter ZP_0778142.1 | Pseudomonas fluorsencens | 3 e-93 | 96% |
OrFinder, BlastX and BlastP were used to identify each open reading frame.