Table 4.
Organism | Sub-type | Complex acronym | Repeat length, nt | Repeat sequence | Spacer length, nt | crRNA length, nt | Target | Cleavage position | Complex composition | Ref. |
---|---|---|---|---|---|---|---|---|---|---|
Staphylococcus epidermidis RP62Aa | III-A | 36 | 5′-GTTCTCGTCCCCTTTTCTT CGGGGTGGGTATCGATCC-3′b | 34–35 | 37 or 43 | dsDNAc | nd | nd | [98, 105] | |
Pyrococcus furiosus | III-B | Pf-Cmr | 30 | 5′-GTTCCAATAAGACTA CAAAAGAATTGAAAG-3′ | 36–42 | 39 or 45 | ssRNA | 14 nt from 3′ crRNA end | Cmr1, Cas10, Cmr3–6 | [24, 106] |
Sulfolobus solfataricus P2 | III-B | Ss-Cmr | 24–25 | 5′-GATAATCTCTTATAG AATTGAAAG-3′ | 36–44 | 45–50 | ssRNA (including crRNA) | At UA dinucleotide | Cmr1, Cas10, Cmr3–7 | [26] |
aThe effector complex has not been isolated or characterized
bPalindromic sequences in the repeat are underlined
cAccording to in vivo data [98]