Table 4.
Comparison of genomic features of four Buchnera Mp strains
| |
Tobacco |
Non-tobacco |
||
|---|---|---|---|---|
| USDA | W106 | F009 | G002 | |
|
Chromosome |
|
|
|
|
| Genome Size (bp) |
643526 |
643502 |
643510 |
643517 |
| Genic Size (bp) |
578745 |
579254 |
579211 |
579216 |
| Intergenic Size (bp) |
64781 |
64248 |
64299 |
64301 |
| Genic G + C (%) |
26.34 |
26.34 |
26.34 |
26.34 |
| Intergenic G + C (%) |
15.72 |
15.68 |
15.67 |
15.67 |
| Protein coding genes (#) |
581 |
581 |
581 |
581 |
| Pseudogenes (#) |
11 |
11 |
12 |
11 |
| tRNA (#) |
32 |
32 |
32 |
32 |
| rRNA (#) |
3 |
3 |
3 |
3 |
| Avg. gene length (bp) |
988.92 |
988.96 |
988.89 |
988.9 |
| Avg. intergenic length (bp) |
118.83 |
118.1 |
118.2 |
118.2 |
| Fold genome coverage |
248.51 |
195.94 |
130.71 |
375.71 |
|
pLeu |
|
|
|
|
| Plasmid size (bp) |
7802 |
7802 |
7800 |
7799 |
| Protein coding genes (#) |
7 |
7 |
7 |
7 |
|
pTrp |
|
|
|
|
| Fragment size (bp) |
2438 |
2437 |
2438 |
2438 |
| Protein coding genes (#) | 2 | 2 | 2 | 2 |
“#” indicates a gene/RNA count for an entity category, which distinguishes from other categories measuring length with unit of bp and G+C content (%).