Table 2. Summary of frequency (given in percentages) of mobile-element-like sequences in the Myotis lucifugus genome (from Pagán et al. ref 74) compared to intragenic frequencies (given in percentages) in the introns of four genes recruited to the submandibular salivary gland proteome.
Genome | C3 | CEL | CLU | PSAP | |
Class1 | |||||
SINES | 39.86 | 41.23 | 42.86 | 31.58 | 41.6 |
LINES | 17.49 | 24.17 | 0 | 10.53 | 16.6 |
ERV/LTR | 9.7 | 8.06 | 23.81 | 15.79 | 8.33 |
Class2 | |||||
DNA/hAT | 12.55 | 19.43 | 14.29 | 42.11 | 33.3 |
DNA/Tigger | 0.27 | 7.11 | 0 | 0 | 8.33 |
Helitrons | 16.25 | 0 | 14.29 | 0 | 0 |
Mariner | 3.32 | 0 | 4.76 | 0 | 0 |
PiggyBac | 0.65 | 0 | 0 | 0 | 0 |
The data for C3 are for all 7 paralogs. The data for CEL are from Gene 1 (based on 21 mobile element sequences in this gene), which is expressed in the SMG. The 5 paralogous CEL genes have only 2–5 mobile sequences/gene. See Fig. 5 for graphical presentation.