Table 1. List of candidate genes derived from previously published Meta-Analysis [3] with inclusion criteria satisfied.
SNP | GENE | SNP-GENE distance OR SNPposition in the gene | Similarity withHHL genes | Sugg.p-value† | H.Sugg.p-value‡ | Availability of antibodies |
rs8077384 | AMZ2 | ∼39 kb | X | X | ||
rs17045059 | ANK2 | NM_001127493.1:c.−40+35627A>T | X | X | ||
rs8077384 | ARSG | ∼92 kb | X | X | ||
rs17195859 | CDH13 | NM_001220488.1:c.778−59471G>A | X | X | X | |
rs898967 | CMIP | NM_030629.2:c.18+37681C>T | X | X | ||
rs10091102 | CSMD1 | NM_033225.5:c.4985−1219C>G | X | X | ||
rs9574464 | DCLK1 | ∼30 kb | X | X | ||
rs6673959 | DFFB | ∼321 kb | X | X | ||
rs12758887 | EVI5 | ∼136 kb | X | X | ||
rs11159133 | FOS | ∼10 kb | X | X | ||
rs7182802 | GABRG3 | NM_001270873.1:c.270+75238C>T | X | X | X | |
rs2687481 | GRM8 | ∼210 kb | X | X | X | |
rs6673959 | KIAA0562 | ∼350 kb | X | X | ||
rs10815873 | PTPRD | NM_002839.3:c.4086+398C>A | X | X | X | |
rs10848114 | RIMBP2 | NM_015347.4:c.−4+11838G>A | X | X | ||
rs12758887 | RPL5 | ∼136 kb | X | X | ||
rs8077384 | SLC16A6 | ∼100 kb | X | X | X | |
rs12758887 | SNORA66 | ∼87 kb | X | in situ probes used | ||
rs12758887 | SNORD21 | ∼91 kb | X | in situ probes used |
Key: Sugg. p-value† = suggestive p-value: p∼10-5,10-6; H.Sugg. p-value‡ = highly suggestive p-value: p∼10-7 [3].