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. Author manuscript; available in PMC: 2014 Feb 1.
Published in final edited form as: J Biochem Mol Toxicol. 2013 Jan 11;27(2):106–115. doi: 10.1002/jbt.21462

TABLE 2.

Promoter DNA Methylation Levels of Diabetes Mellitus-Related Genes Associated with Urinary Arsenical Concentrations

Gene
symbol
Gene name Promoter
methylation
change with
increasing urinary
arsenical (ng/ml)
Arsenical
group
(ng/ml)
Association with
diabetes mellitus (DM)
GAD1 glutamate decarboxylase 1 hypomethylation MMAs Major β cell autoantigen in T1DM [43]
INPPL1 inositol polyphosphate phosphatase-like 1 hypomethylation iAs MMAs Negative regulator of insulin signaling [46]; expression associated with insulin resistance [70]
INS insulin hypomethylation MMAs Promotes glucose uptake from blood into peripheral tissues [71]
IRF1 interferon regulatory factor 1 hypomethylation MMAs Promotes β cell apoptosis [41]
MAP3K1 mitogen-activated protein kinase kinase kinase 1 hypomethylation DMAs Promotes β cell apoptosis [52]
PDX1 pancreatic and duodenal homeobox 1 hypomethylation DMAs Transcriptional activator of insulin gene; important in β cell differentiation, development, function and survival [50, 51]
PRKCD protein kinase C delta hypermethylation DMAs Promotes β cell apoptosis [53]; regulates insulin signaling [54]
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B hypomethylation MMAs Regulator of TNFa-mediated apoptosis [72]; levels of plasma soluble fraction of receptor positively correlated with insulin resistance [45], severity of diabetic retinopathy [73], and predicting risk of end stage renal disease [74], and chronic kidney disease [75] in diabetics
TRAF6 TNF receptor-associated factor 6 hypomethylation MMAs Promotes β-cell apoptosis [42]
SOCS6 suppressor of cytokine signaling 6 hypomethylation MMAs Regulator of insulin signaling [47, 48]
VAMP2 vesicle-associated membrane protein 2 hypomethylation MMAs Minor antigen in T1DM [44]; involved in translocation of glucose transporter to cell membrane, overexpressed in insulin-resistant tissue [49]