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. Author manuscript; available in PMC: 2014 Nov 19.
Published in final edited form as: Anal Chem. 2013 Nov 1;85(22):10761–10770. doi: 10.1021/ac401875h

Table 1.

Analysis of the most abundant short sequences

Initial
library
(control)
Pool 1 Pool 2 Pool 3 Pool 4 Pool 5 Pool 6 Pool 7
Length (nt) 45 50 47 47 47 47 47 54, 46, 42
Normalized abundance 0.157% 0.27% 8.08% 9.43% 7.28% 11.01% 13.13% 28.44%, 22.68%,
26.52%
Motif CGTACTAC CAGGTAGGGT GGAGCCA GGAGCCA GGAGCCA GGAGCCA GGAGCCA CGTGCTACCGTGAA,
GAGCCA,
Normalized
abundance
of motif
Perfect
match
0.004% 0.13% 5.04% 5.93% 4.82% 7.71% 6.57% 14.06%, 6.71%
1
mismatch
0.024% 0.17% 6.75% 8.98% 6.95% 10.15% 8.40% 16.93%,9.27%
MEME* 0.035% 0.18% 6.79% 9.18% 7.02% 10.49% 8.61% 20.45%,9.27%
*

The p-value is equal to or smaller than 0.05 in MEME.