Table 3.
Data set | Total number | GC % | Size (Mb) | Mean (bp) | Max (bp) | |
---|---|---|---|---|---|---|
DBM-DBa | Egg | 70 234 | 45.3% | 31.4 | 447 | 14 617 |
Larva | 69 008 | 47.9% | 24.8 | 436 | 20 840 | |
Pupa | 73 194 | 45.3% | 32.5 | 444 | 20 840 | |
Adult | 55 943 | 45.2% | 30.1 | 443 | 14 617 | |
CRS | 54 869 | 51.8% | 24.9 | 454 | 20 804 | |
RFS | 58 565 | 48.8% | 27.4 | 468 | 20 840 | |
Total | 171 262 | 43.0% | 93.6 | 547 | 23 074 | |
KONAGAbaseb | NCBI | 1722 | 50.1% | 1.1 | 645 | 16 113 |
Midgut | 12 406 | 49.2% | 6.0 | 480 | 879 | |
Egg | 6904 | 42.6% | 3.1 | 446 | 855 | |
Testis | 16 308 | 44.2% | 9.7 | 446 | 880 | |
Larvae (4th) | 147 370 | 42.8% | 66.5 | 451 | 11 311 | |
Total | 84 570 | 43.0% | 47.8 | 564 | 16 249 |
aSamples at four basic developmental stages of transcriptomes in DBM-DB are from DBM susceptible (Fuzhou-S) strain. CRF and RFS represent the chlorpyrifos- and fipronil-resistant strains, respectively. The total unigenes is the result of clustering and redundancy filtering of six transcriptomes.
bKONAGAbase unigenes were assembled the EST/mRNA sequences from NCBI, the ESTs from midgut, egg and testes, and the RNA-seq contigs of the fourth instar DBM larvae.