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. 2014 Jan 10;9(1):e85148. doi: 10.1371/journal.pone.0085148

Table 4. Genes Upregulated in the Lungs of HDM-treated DDAH1-transgenic Mice versus HDM-treated Wild Type Mice.

Symbol Name Fold Change
Ribosomal Complex
Rps21 ribosomal protein S21 5.4796
Rps12 ribosomal protein S12 5.4397
Rpl30 ribosomal protein L30 4.2587
Mrps16 mitochondrial ribosomal protein S16 4.1518
Rpl34 ribosomal protein L34 3.8427
Sec61b Sec61 beta subunit 3.7764
Rps14 ribosomal protein S14 3.6956
Rpl36a ribosomal protein L36A 3.6885
Rps15a ribosomal protein S15A 3.6498
Rpl37a ribosomal protein L37a 3.6295
Pttg1 pituitary tumor-transforming gene 1 3.5963
Rplp2 ribosomal protein, large P2 3.4879
Rps27 ribosomal protein S27 3.4532
Rpl27 ribosomal protein L27 3.4067
Rps28 ribosomal protein S28 3.3511
Mrpl20 mitochondrial ribosomal protein L20 3.2634
Ribosomal Pseudogene
Gm11968 Rps15a pseudogene 4.4686
Gm12191 ribosomal protein L30 pseudogene 4.2620
Gm13253 ribosomal protein S15a pseudogene 4.0395
Rpl34-ps1 ribosomal protein L34, pseudogene 1 3.8391
Rplp2-ps1 ribosomal protein, large P2, pseudogene 1 3.3696
Metabolism/Oxidative Process
Qdpr quinoid dihydropteridine reductase 5.7248
Glrx5 glutaredoxin 5 homolog (S. cerevisiae) 5.0037
Ndufa2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 4.9044
Ndufs5 NADH dehydrogenase (ubiquinone) Fe-S protein 5 4.7132
Sumf1 sulfatase modifying factor 1 4.4089
Cox7a2l cytochrome c oxidase subunit VIIa polypeptide 2-like 4.2862
Cox17 cytochrome c oxidase, subunit XVII assembly protein homolog (yeast) 4.1528
Cytokine/Chemokine
Ccl20 chemokine (C-C motif) ligand 20 6.3854
Cxcl3 chemokine (C-X-C motif) ligand 3 3.9814
Other
Dtwd1 DTW domain containing 1 14.2305
Flrt2 fibronectin leucine rich transmembrane protein 2 10.6123
1110038B12Rik RIKEN cDNA 1110038B12 gene 8.9809
Scgb3a2 secretoglobin, family 3A, member 2 7.4584
Fpr2 formyl peptide receptor 2 6.5479
Fkbp14 FK506 binding protein 14 6.3078
Hbxip hepatitis B virus x interacting protein 4.8871
BC002163 NADH dehydrogenase Fe-S protein 5 pseudogene 4.7683
S100a13 S100 calcium binding protein A13 4.6935
H3f3a H3 histone, family 3A 4.6727
Commd1 COMM domain containing 1 4.6707
Osgep O-sialoglycoprotein endopeptidase 4.2386
2010001M09Rik RIKEN cDNA 2010001M09 gene 4.1526
Mettl7a2 methyltransferase like 7A2 4.1202
0610007C21Rik RIKEN cDNA 0610007C21 gene 3.9575
Tmbim4 transmembrane BAX inhibitor motif containing 4 3.9312
Snrpe small nuclear ribonucleoprotein E 3.9247
Plac9 placenta specific 9 3.7440
Gngt2 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 3.5724
Tomm7 translocase of outer mitochondrial membrane 7 homolog (yeast) 3.5352
Gm9846 predicted gene 9846 3.4544
Ccdc84 coiled-coil domain containing 84 3.4251
S100a6 S100 calcium binding protein A6 (calcyclin) 3.3956
Vamp8 vesicle-associated membrane protein 8 3.3746
Shfm1 split hand/foot malformation (ectrodactyly) type 1 3.3414
Cd52 CD52 antigen 3.3025
Mettl7a1 methyltransferase like 7A1 3.2925
Pcolce2 procollagen C-endopeptidase enhancer 2 3.2669
Fam166a family with sequence similarity 166, member A 3.2667
Neat1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 3.2657

NCBI Gene Expression Omnibus accession numbers GSE49047 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE49047).