Strains
|
|
|
E. coli DH5α
|
supE44, ΔlacU169 (φ80lacZDM15), hsdR17, recA1, endA1, gyrA96,thi1,relA1. |
Invitrogen |
C. glutamicum ATCC13032 |
Biotin-auxotrophic wild type. |
[48]
|
ΔaceE
|
C. glutamicum wild type with deletion of the aceE gene, coding for the E1p subunit of the pyruvate dehydrogenase-complex (PDHC). |
[49]
|
ΔaceE Δpqo
|
C. glutamicum ΔaceE strain with deletion of the pqo gene, coding for pyruvate:quinone oxidoreductase. |
[50]
|
ΔaceE Δpqo Δpgi
|
C. glutamicum ΔaceE Δpqo strain with deletion of the pgi gene, coding for the phosphoglucose isomerase. |
[28]
|
ΔaceE Δpqo Δpgi Δpyc
|
C. glutamicum ΔaceE Δpqo Δpgi strain with deletion of the pyc gene, coding for the pyruvate carboxylase. |
[28]
|
C. glutamicum sensor strain |
C. glutamicum wild type strain with chromosomally integrated Lrp-sensor (integrated into the intergenic region of cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. |
This work. |
ΔaceE sensor strain |
ΔaceE strain with chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. |
This work. |
ΔaceE Δpqo sensor strain |
ΔaceE Δpqo strain with chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. |
This work. |
ΔaceE Δpqo Δpgi sensor strain |
ΔaceE Δpqo Δpgi strain chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. |
This work. |
ΔaceE Δpqo Δpgi Δpyc sensor strain |
ΔaceE Δpqo Δpgi Δpyc strain with chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. |
This work. |
Plasmids
|
|
|
pJC1 |
E. coli-C. glutamicum shuttle vector, KanR, oriVEc, oriVCg. |
[51]
|
pJC1-lrp-brnF'-eyfp |
pJC1derivative containing Lrp-sensor cassette, which consists of lrp (cg0313), the intergenic region of lrp brnF (cg0314) and a transcriptional fusion of brnF with eyfp. |
[22]
|
pJC4-ilvBNCE |
pJC1derivative carrying the ilvBNCE genes coding for the L-valine biosynthetic enzymes acetohydroxyacid synthase, isomeroreductase, and transaminase B. |
[25]
|
pJC4-ilvBNCE-crimson |
pJC4-ilvBNCE derivative containing e2-crimson under transcriptional control of Ptac. |
This work. |
pK18-mobsacB |
Vector for allelic exchange in C. glutamicum; KanR; oriVEc, sacB, lacZα. |
[52]
|
pK18-mobsacB-cg1121, cg1122-Lrp-sensor |
pK18mobsacB derivative for genomic integration of the Lrp-sensor in the intergenic region of cg1121-cg1122 in C. glutamicum. |
This work. |
Oligonucleotides
|
Sequence (5′ → 3′)
|
|
lacI-fw |
TCAAGCCTTCGTCACTGGTCC
|
This work. |
E2-Crimson-rv |
CTACTGGAACAGGTGGTGGCG
|
This work. |
Int-cg1121-fw |
TTGGCGTGTGGTTGGTTAG
|
This work. |
Int-cg1122-rv |
CGCATCAAGCAGATCTCTG
|
This work. |