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. 2014 Jan 17;9(1):e85731. doi: 10.1371/journal.pone.0085731

Table 1. Bacterial strains, plasmids, and oligonucleotides used in this study.

Strains, plasmids Relevant characteristics Reference
Strains
E. coli DH5α supE44, ΔlacU169 (φ80lacZDM15), hsdR17, recA1, endA1, gyrA96,thi1,relA1. Invitrogen
C. glutamicum ATCC13032 Biotin-auxotrophic wild type. [48]
ΔaceE C. glutamicum wild type with deletion of the aceE gene, coding for the E1p subunit of the pyruvate dehydrogenase-complex (PDHC). [49]
ΔaceE Δpqo C. glutamicum ΔaceE strain with deletion of the pqo gene, coding for pyruvate:quinone oxidoreductase. [50]
ΔaceE Δpqo Δpgi C. glutamicum ΔaceE Δpqo strain with deletion of the pgi gene, coding for the phosphoglucose isomerase. [28]
ΔaceE Δpqo Δpgi Δpyc C. glutamicum ΔaceE Δpqo Δpgi strain with deletion of the pyc gene, coding for the pyruvate carboxylase. [28]
C. glutamicum sensor strain C. glutamicum wild type strain with chromosomally integrated Lrp-sensor (integrated into the intergenic region of cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. This work.
ΔaceE sensor strain ΔaceE strain with chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. This work.
ΔaceE Δpqo sensor strain ΔaceE Δpqo strain with chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. This work.
ΔaceE Δpqo Δpgi sensor strain ΔaceE Δpqo Δpgi strain chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. This work.
ΔaceE Δpqo Δpgi Δpyc sensor strain ΔaceE Δpqo Δpgi Δpyc strain with chromosomally integrated Lrp-sensor (cg1121-cg1122) and pJC4-ilvBNCE-crimson plasmid. This work.
Plasmids
pJC1 E. coli-C. glutamicum shuttle vector, KanR, oriVEc, oriVCg. [51]
pJC1-lrp-brnF'-eyfp pJC1derivative containing Lrp-sensor cassette, which consists of lrp (cg0313), the intergenic region of lrp brnF (cg0314) and a transcriptional fusion of brnF with eyfp. [22]
pJC4-ilvBNCE pJC1derivative carrying the ilvBNCE genes coding for the L-valine biosynthetic enzymes acetohydroxyacid synthase, isomeroreductase, and transaminase B. [25]
pJC4-ilvBNCE-crimson pJC4-ilvBNCE derivative containing e2-crimson under transcriptional control of Ptac. This work.
pK18-mobsacB Vector for allelic exchange in C. glutamicum; KanR; oriVEc, sacB, lacZα. [52]
pK18-mobsacB-cg1121, cg1122-Lrp-sensor pK18mobsacB derivative for genomic integration of the Lrp-sensor in the intergenic region of cg1121-cg1122 in C. glutamicum. This work.
Oligonucleotides Sequence (5′ → 3′)
lacI-fw TCAAGCCTTCGTCACTGGTCC This work.
E2-Crimson-rv CTACTGGAACAGGTGGTGGCG This work.
Int-cg1121-fw TTGGCGTGTGGTTGGTTAG This work.
Int-cg1122-rv CGCATCAAGCAGATCTCTG This work.