Table 2. Rs12979860 alleles and genotypes frequencies in the 1,092 individuals enrolled in the 1000 Genomes Project database.
Population | Alleles n (%) | Genotypes n (%) | HWE | ||||
C | T | C/C | C/T | T/T | n | ||
EUROPEANS | 517 (68.2) | 241 (31.8) | 178 (47) | 161 (42.5) | 40 (10.5) | 0.68 | 379 |
Iberians (Spain) | 22 (78.6) | 6 (21.4) | 9 (64.3) | 4 (28.6) | 1 (7.1) | 0.57 | 14 |
Utah residents (U.S.A) with Northern and Western European ancestry | 127 (74.7) | 43 (25.3) | 49 (57.6) | 29 (34.2) | 7 (8.2) | 0.37 | 85 |
Finnish | 133 (71.5) | 53 (28.5) | 47 (50.5) | 39 (42) | 7 (7.5) | 0.77 | 93 |
British | 118 (66.3) | 60 (33.7) | 39 (43.8) | 40 (45) | 10 (11.2) | 0.95 | 89 |
Tuscans (Italy) | 117 (59.7)* | 79 (40.3) | 34 (34.7)** | 49 (50) | 15 (15.3) | 0.69 | 98 |
Europeans (without Tuscans) | 400 (71.2)* | 162 (28.8) | 144 (51.2)** | 112 (39.9) | 25 (8.9%) | 0.63 | 281 |
EAST ASIANS | 529 (92.5) | 43 (7.5) | 243 (85) | 43 (15) | – | 0.41 | 286 |
Japanese (Tokyo) | 159 (89.3) | 19 (10.7) | 70 (78.7) | 19 (21.3) | – | 0.26 | 89 |
Chinese (Beijing) | 179 (92.3) | 15 (7.7) | 82 (84.5) | 15 (15.5) | – | 0.41 | 97 |
Chinese | 191 (95.5) | 9 (4.5) | 91 (91) | 9 (9) | – | 0.63 | 100 |
AFRICANS | 195 (39.6) | 297 (60.4) | 38 (15.4) | 119 (48.4) | 89 (36.2) | 0.86 | 246 |
Kenyans | 95 (49) | 99 (51) | 19 (19.6) | 57 (58.8) | 21 (21.6) | 0.08 | 97 |
Nigerians | 59 (33.5) | 117 (66.5) | 11 (12.5) | 37 (42) | 40 (45.5) | 0.59 | 88 |
Afro-Americans | 41 (33.6) | 81 (66.4) | 8 (13.1) | 25 (41) | 28 (45.9) | 0.52 | 61 |
MIXED AMERICANS | 202 (55.8) | 160 (44.2) | 55 (30.4) | 92 (50.8) | 34 (18.8) | 0.68 | 181 |
Mexicans | 69 (52.3) | 63 (47.7) | 17 (25.8) | 35 (53) | 14 (21.2) | 0.61 | 66 |
Puertoricans | 71 (64.5) | 39 (35.5) | 22 (40) | 27 (49.1) | 6 (10.9) | 0.59 | 55 |
Colombians | 62 (51.7) | 58 (48.3) | 16 (26.7) | 30 (50) | 14 (23.3) | 0.99 | 60 |
Note: HWE, Hardy-Weinberg Equilibrium. * p = 0.003. ** p = 0.005.