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. 2014 Jan 20;9(1):e85518. doi: 10.1371/journal.pone.0085518

Table 3. Proximal CME context in midline and tracheal enhancers.

Mostcommon1 Number2 Neverfound3 Tissue4 PredictedConsensus5
A ACGTG C 14 A ACGTG G midline (A/G/T) ACGTG C
T ACGTG A 10 G ACGTG T trachea (A/T) ACGTG (A/C/T)
T ACGTG C 10 T ACGTG G both (A/T) ACGTG C

Sixty-six CMEs were found in all midline and tracheal enhancers examined. 1The nucleotides found directly 5′ and 3′ of the CME within the enhancers and 2 the number of times that sequence was found in all the midline and tracheal enhancers are listed. The three sequence contexts found in the left column represent 52% of the CMEs found within all enhancers (34/66; Table S4), while 3other sequence contexts were not found in any enhancers. 4, 5Sequences flanking the sixty-six CMEs were used to derive a consensus sequence for genes expressed in the midline, trachea or both tissues.