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. 2014 Jan 20;9(1):e85518. doi: 10.1371/journal.pone.0085518

Table 4. Sequence of synthetic reporter constructs.

Midline only
synth 1 ATTACACTCTCCGCTTCAGAGAACGTGCTGCTGTTGCATATTCCGA
synth 2 TTCAGAGAACGTGCTGCTGTTGCATATTCCGAGATAAAATGTCATTGT
synth 3 GCGACACTCTCCGCTTCAGAGAACGTGCTGCTGTTGCATATTCCGA
synth 4 ATTACACTCTCCGCTTCAGAGAACGTGCTGCTTAAAA
synth 5 TATGCACAATGACATTTAGCAGAAATTCAGACGTGCCACAGACCA
Neither Midline nor Trachea
Sox CACAATGACGTGCCACAGA
synth 6 ATTACACTCTCCGCTTCAGAGAACGTGCTGCTGGCGCATATTCCGA
Both Midline and Trachea
Toll AAATTTGTACGTGCCACAGA
synth 7 AAATTTGTACGTGCCACAGATAATTA
synth 8 AAATTTGTACGTGCCACAGAGTTGCAT
synth 9 AAATTTGTACGTGCCACAGAGGCGTGGGAACCGAGCTGAAAGTAAGTTTCTCACACA
synth 10 ACAATGACATTTCAGACGTGCCACA
Trachea only
synth 11 AAATTTGTACGTGCTTTTTATCTCTGAAGCGGAGAGTGTAAT
synth 12 AAATTTGTACGTGCCACAGAGGATGCACCCACGAGCTGAAAGTAATGGGCCACCA

Sequences of synthetic constructs multimerized four times and fused to GFP within reporter constructs are listed according to the tissue that expressed each synthetic reporter (Fig. 9). The CME is enlarged within each sequence. Sites important for midline expression within the wrapper enhancer [67] are underlined in synths 1 6 and include putative binding sites for Sox (ATTGT), pointed (CTCTCCG) and unknown (AAAA) transcription factors. Binding sites for engrailed (TAATTA), Vvl (TTGCAT) and Suppressor of Hairless (GTGGGAAC CGAGCTGAAAGTAAGTTTCTCAC ) were added to the Toll CME sequence and shown in bold in synths 7 9.