. 2014 Jan 21;5:4. doi: 10.3389/fmicb.2014.00004

Table 4.

List of proteins containing G[AG].$ and KK$ motifs.

Pattern	Protein group	P-value (Sig)	Match	No. unrelated proteins	Description
G[AG].$	Type IV secretion	2.64E–04	GGN	9	virB11 protein homolog\|9992\|YP_034060\|49476019\|8040\| [Bartonella henselae str. Houston-1]
			GAK		virB4\|10558\|NP_863348\|32469876\|8343\|VirB4 [Campylobacter jejuni subsp. jejuni 81-176]
			GAK		virB8\|10560\|NP_863298\|32469826\|8344\|VirB8 [Campylobacter jejuni subsp. jejuni 81-176]
			GAE		cag pathogenicity island protein (cag11)\|10866\|NP_207327\|15645157\|8497\| [Helicobacter pylori 26695]
			GGK		trwF protein\|9938\|YP_034270\|49476229\|8013\|[Bartonella henselae str. Houston-1]
			GAI		trwH2 hypothetical protein BH15720\|9944\|YP_034268\|49476227\|8016 [Bartonella henselae str. Houston-1]
			GAS		cag pathogenicity island protein (cag25)\|10894\|NP_207342\|15645172\|8511\| [Helicobacter pylori 26695]
			GGN		Putative type IV secretion system protein\|41299\|NP_790379\|NP_790379.1\|18355\| [Pseudomonas syringae pv. tomato str. DC3000]
			GAI		trwH1 hypothetical protein BH15690\|9942\|YP_034265\|49476224\|8015\| [Bartonella henselae str. Houston-1]
			GGN		cag pathogenicity island protein (cag7)\|10904\|NP_207323\|15645153\|8516\| [Helicobacter pylori 26695]
KK$	Adherence	0.034	KK	11	hmw2C putative accessory processing protein [Haemophilus influenzae]\|2847\|AAA20526\|482843\|2554\|
			KK		kpsC polysaccharide modification protein [Campylobacter jejuni subsp. jejuni NCTC 11168]\|10454\|NP_282555\|15792732\|8291\|
			KK		ica operon transcriptional regulator [Staphylococcus aureus subsp. aureus MW2]\|3137\|NP_647402\|21284314\|2699\|
			KK		pavA adherence and virulence protein A [Streptococcus agalactiae 2603V/R]\|9719\|NP_688199\|22537348\|7896\|
			KK		Type 4 fimbrial biogenesis protein PilO [Pseudomonas aeruginosa PAO1]\|8738\|NP_253729\|15600235\|7426\|
			KK		Type 4 fimbrial biogenesis protein PilN [Pseudomonas aeruginosa PAO1]\|8740\|NP_253730\|15600236\|7427\|
			KK		Putative collagen binding protein [Streptococcus pyogenes MGAS315] SpyM3_0098\|9709\|NP_663902\|21909634\|7891\|
			KK		oapA opacity associated protein [Haemophilus influenzae Rd KW20]\|2865\|NP_438494\|16272282\|2563\|
			KK		neuC1 putative N-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatase [Campylobacter jejuni subsp. jejuni NCTC 11168]\|10349\|NP_282290\|15792467\|8218\|
			KK		waaE D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168]\|10396\|NP_282297\|15792474\|8262\|
			KK		hmw1C putative accessory processing protein [Haemophilus influenzae]\|2841\|AAA20529\|475773\|2551\|
			KK		cytotoxin [Escherichia coli O157:H7]\|11176\|AAC70163\|3822209\|8652\|
KK$	Lipoprotein	0.016	KK	9	Multidrug resistance outer membrane efflux protein mdtP; Flags: Precursor\|58083\|Q8CVH8\|24068\| Escherichia coli
			KK		ylpB/yscJ needle complex inner membrane lipoprotein [Yersinia pestis CO92]\|20866\|NP_395193\|16082747\|13354\|
			KK		Yop proteins translocation lipoprotein J OS = Yersinia enterocolitica GN = yscJ PE = 2 SV = 1\|18600\| AltName: Full = Lipoprotein ylpB; Flags: Precursor; \|Q01251\|11895\|
			KK		Lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. CT18]\|44580\|NP_455466\|NP_455466.1\|19996\|
			KK		LPP20 lipoprotein OS = Helicobacter pylori GN = lpp20 PE = 1 SV = 1\|17433\|P0A0V0\|10728\|
			KK		Outer membrane factor of efflux pump [Escherichia coli str. K-12 substr. MG1655]58055\|NP_418504\|NP_418504\|24053\|
			KK		Lipoprotein, putative [Enterococcus faecalis V583]9889\|NP_816134\|29376980\|7982\|
			KK		Iron transport lipoprotein SirF [Staphylococcus aureus subsp. aureus Mu50]\|8986\|NP_371657\|15924123\|7550\|
			KK		Export protein prsA cytoplasmic membrane protein, protein folding\|3480\|GBAA2336 prsA-3 \|GBAA2336\|2870\|
			KK		LPP20 lipoprotein OS = Helicobacter pylori J99 GN = lpp20 PE = 3 SV = 1\|17432\|P0A0V1\|
			KK		Yop proteins translocation lipoprotein J OS = Yersinia pseudotuberculosis GN = yscJ PE = 2 SV = 1\|18863\| AltName: Lipoprotein ylpB \|P69973\|12158\|
			KK		YaeC family lipoprotein [Enterococcus faecalis V583] [Enterococcus faecalis V583]\|39473\|NP_815743\|NP_815743.1\|17442\|
			KK		Major outer membrane lipoprotein OS = Yersinia pestis GN = lpp PE = 3 SV = 1\|24369\| \|Q8ZDZ6\|15171\|
			KK		Putative lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2]\|44956\|NP_805720\|NP_805720.1\|20184\|