Table 1.
Collection of DNA extracted from C. gigas samples: geographical origins, virus DNA amounts and related GenBank accession numbers
|
Isolate code |
Origin |
Nature of sample |
Viral DNA quantity (genome copies ng
-
1 of total DNA) |
GenBank accession number |
|---|---|---|---|---|
| C2/C6 | ||||
| 1993/002 |
France |
Larvae |
5.15E + 04 |
JN80065 |
| 1994/005 |
France |
< 1 year |
6.54E + 03 |
JN80068 |
| 1994/006 |
France |
< 1 year |
4.04E + 04 |
JN80069 |
| 1994/011 |
France |
< 1 year |
6.60E + 04 |
JN80070 |
| 1994/012 |
France |
Larvae |
3.79E + 05 |
JN80071 |
| 1995/020 |
France |
Larvae |
1.35E + 05 |
JN80072 |
| 2005/001 |
France |
< 1 year |
7.05E + 04 |
JN80081 |
| 2005/005 |
France |
< 1 year |
1.23E + 05 |
JN80082 |
| 2005/012 |
France |
< 1 year |
9.96E + 04 |
JN80084 |
| 2006/005 |
France |
Larvae |
3.21E + 03 |
JN80087 |
| 2006/009 |
France |
< 1 year |
2.21E + 04 |
JN80088 |
| 2006/018 |
France |
< 1 year |
1.31E + 04 |
JN80090 |
| 2007/004 |
France |
Larvae |
1.03E + 06 |
JN80091 |
| 2007/026 |
France |
< 1 year |
1.41E + 04 |
JN80094 |
| 2007/028 |
France |
< 1 year |
1.00E + 04 |
JN80095 |
| 2007/029 |
France |
< 1 year |
1.04E + 05 |
JN80096 |
| 2007/030 |
France |
< 1 year |
1.21E + 04 |
JN80097 |
| 2007/034 |
France |
1-2 years |
1.18E + 04 |
JN80098 |
| 2007/035 |
France |
< 1 year |
8.93E + 03 |
JN80099 |
| 2008/017 |
France |
< 1 year |
4.30E + 02 |
JN800100 |
| 2008/019 |
France |
1-2 years |
8.43E + 06 |
JN800101 |
| 2008/021 |
France |
Larvae |
2.45E + 06 |
JN800102 |
| 2008/023 |
France |
Adult |
2.65E + 05 |
JN800103 |
| 2008/020 |
France |
Larvae |
1.66E + 03 |
- |
| 2008/025 |
France |
Adult |
4.33E + 05 |
JN800104 |
| 2008/045 |
France |
1-2 years |
8.60E + 02 |
JN800107 |
| 2008/050 |
France |
< 1 year |
4.68E + 02 |
JN800108 |
| 2008/055 |
France |
< 1 year |
2.56E + 05 |
JN800109 |
| 2008/059 |
France |
< 1 year |
2.60E + 05 |
JN800110 |
| 2008/073 |
France |
1-2 years |
4.55E + 04 |
JN800111 |
| 2008/079 |
France |
< 1 year |
1.45E + 04 |
JN800112 |
| 2008/083 |
France |
< 1 year |
2.74E + 04 |
JN800113 |
| 2008/092 |
France |
< 1 year |
2.24E + 03 |
JN800114 |
| 2009/002 |
France |
< 1 year |
2.67E + 03 |
JN800115 |
| 2009/021 |
France |
< 1 year |
7.17E + 03 |
JN800116 |
| 2009/022 |
France |
< 1 year |
1.04E + 04 |
JN800117 |
| 2009/027 |
France |
< 1 year |
3.31E + 03 |
JN800118 |
| 2009/035 |
France |
< 1 year |
2.19E + 03 |
JN800119 |
| 2010/002 |
France |
< 1 year |
4.44E + 04 |
JN800120 |
| 2010/008 |
France |
< 1 year |
2.57E + 04 |
JN800121 |
| 2010/012 |
France |
< 1 year |
1.58E + 05 |
JN800122 |
| 2010/013 |
France |
< 1 year |
1.61E + 05 |
JN800123 |
| 2010/021 |
France |
< 1 year |
8.38E + 03 |
JN800124 |
| 2010/023 |
France |
< 1 year |
6.42E + 05 |
JN800125 |
| 2010/026 |
France |
< 1 year |
5.98E + 05 |
JN800126 |
| 2007/07-CB2 |
USA |
- |
5.02E + 04 |
JN800128 |
| 2010/158-144 | Japan | < 1 year | 3.00E + 02 | JN800133 |